Gene Syncc9902_1194 details

Gene Information

• Locus tag: Syncc9902_1194
• ID: 3743233
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1156876
• End bp: 1157514
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637771374
• Product: ATPase
• Protein accession: YP_377202
• Protein GI: 78184767
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1122] ABC-type cobalt transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.157933
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCAAC TGTCTGATGT CACCTACGCA CCCGCGACGG TTGCGTCGCC CGTGCTTCGG 
GGTGCCAGTT TCCATGCTGA GCGAGGAAAA CCGCTTTTGA TTGCAGGAGC CAGTGGGTCT 
GGAAAGACAT CTTTACTAGA GGTGATCAGT GGCTTATCAG CCCCGCGATC TGGTTCGATT 
TCCTGGGAAG GAAAGGTGAT GAACCGGCGA CAAAGAAGGG GGCTTTGCGG AATGGTGTTT 
CAGTTCCCTG AACGCCATTT TCTTGGATTG AATGTGAGCC AAGAACTGCG TTTAGGGCAC 
CGGCGCTTGG GAAGCGATCG CCAAGATCAG GTGCTTCATC GGGTTGGGTT GCAGAAGATC 
TCGCGTATGA CGCCTCCGGA ACAACTGAGC GGAGGACAAC AACGCCGCTT GGCTTTGGCT 
GTTCAACTGT TGCGCGGTGC TGAAGTTTTA CTCCTTGATG AACCCACTGC TGGCTTGGAT 
TGGTCGGTCC GCTCCGAGGT GTTGAAGCTT TTGTCAGACC TCGCGCAAGA GCAAGTTTTG 
ATCGTGGTGA CCCATGAGCC TGAATTATTC AATCGATGGG ATTCGGATCG ATTACGACTG 
GAGAACGGCC AGCTGACTTC GATGACTACA TTGATTTGA 

 

Protein sequence

MLQLSDVTYA PATVASPVLR GASFHAERGK PLLIAGASGS GKTSLLEVIS GLSAPRSGSI 
SWEGKVMNRR QRRGLCGMVF QFPERHFLGL NVSQELRLGH RRLGSDRQDQ VLHRVGLQKI 
SRMTPPEQLS GGQQRRLALA VQLLRGAEVL LLDEPTAGLD WSVRSEVLKL LSDLAQEQVL 
IVVTHEPELF NRWDSDRLRL ENGQLTSMTT LI