Gene Syncc9902_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1190 
Symbol 
ID3743229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1154310 
End bp1155083 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content58% 
IMG OID637771370 
Producthypothetical protein 
Protein accessionYP_377198 
Protein GI78184763 
COG category[S] Function unknown 
COG ID[COG1836] Predicted membrane protein 
TIGRFAM ID[TIGR00297] conserved hypothetical protein TIGR00297 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.402529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGATTG AAGCCCTGGT CGTGAATGGT GTTCTTATCA GCTTTGCCCA GCGCACCCCG 
CTTCTCACAA CACAAGGATG GATCCACGCG GCAGCCCTTG GAACGATCTT GTGGGGGAGC
CTCGGTTGGC GTGGTTGGTT GGCCGTTGTT GTGTATTTGG TTGTAGGAAG CTTGGTGACG
CGCATTGGCT TCAAGAACAA GCAACGCCGT GGGTTGGCCG AAGCCCGTGA GGGACGACGA
GGCCCTGAAA ACGTCTGGGG CTCAGCAGCG GTCGGTGCGG GTCTGGCTCT CGTTCTTGCG
GCTTCACCGG AAGACGCCAG TCTTTGGCGC CAGGTTGTGT TGATTGGATT TTCGGCAAGT
TTTGCCGCCA AACTGGCCGA TACTTTTGGC AGTGAAATTG GCAAGCGTTG GGGTCGTACG
ACCCTGTTGA TCACCACACT CAGGCCGGTC GCACCTGGAA CCGATGGTGC GATCAGTCTG
GAAGGAACCA TGGCGAGCGC TGCTGGCAGT GTGGTGATGA CCTTTGCGCT TTGGGGGCTC
AGTTCGTCTC AACTCCCCCT GATCCCCAAC GCCATGGCAG CTGGAGTGGT GATGGTGGTG
GGTCTACTGG CCACCCTTGC TGAAAGTGTC ATGGGAGCCG TTGTTCAAAA CCGCGTGGGG
TGGCTGAGCA ATGAGCTGAT TAATGCGCTG CAAACGCTTC TGGCAGCTGG TTTGGCAATG
GGCTGGACGG CACTAGCAAG CCATCTTGTG CTGCCAACAA TCGCAGGGTT GTAA
 
Protein sequence
MWIEALVVNG VLISFAQRTP LLTTQGWIHA AALGTILWGS LGWRGWLAVV VYLVVGSLVT 
RIGFKNKQRR GLAEAREGRR GPENVWGSAA VGAGLALVLA ASPEDASLWR QVVLIGFSAS
FAAKLADTFG SEIGKRWGRT TLLITTLRPV APGTDGAISL EGTMASAAGS VVMTFALWGL
SSSQLPLIPN AMAAGVVMVV GLLATLAESV MGAVVQNRVG WLSNELINAL QTLLAAGLAM
GWTALASHLV LPTIAGL