Gene Syncc9902_1184 details

Gene Information

• Locus tag: Syncc9902_1184
• ID: 3743262
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1150219
• End bp: 1150896
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637771364
• Product: ATPase
• Protein accession: YP_377192
• Protein GI: 78184757
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.795417
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCCTGG ACCAACGACT CCAAACGACC AGTCTCACCA TCAGGGCTGA TGAACGGGTG 
GTTTTACTTG GAGCCAGTGG CGCAGGAAAA ACCACCCTCA TCAAACTCTG CAACGGGAGC 
CTGCAACCCT CGCGGGGCGC CCTCCAATGG CGTGGTCAAC CGCTCAAGAG ATTGCCGCGT 
CATGAACGGC GATCAATTGG CACGTTTTGG CAGGACTTAC GACTGGTTGA GGAGCTGAGC 
GTGGTCCAAA ACATCAATAG CGGTGCCCTT GGGCGTCATG GCTTGATGTG GGCCTTGAGA 
AATCTGCTTG GTGCCCTGGA AAAGGACGCG TGTCTCGCGG TAATGCAAGA GGTCCACCTA 
GAGCCTTCAC TGCTCAAACG AGCCGTGACC GAACTCTCAG GAGGTCAGCG ACAACGCGTT 
GCTTTGGCTC GATTGCTGCG CCAAAGGCCT GAACTAGTGC TCGCGGATGA ACCTTTGTCG 
GCCCTGGATC CTGTCATCGC CAGGGATGTC TTGGACACAC TGCTTTCACT TCCAGGGTGT 
CTGATCAGCT TGCATCGCCC TGATCTCATC CATCGATTTG AACGCGTCCT GGGTCTACGT 
AACGGAGCCC TTGTTCTTGA CGCGGCACCA GACATGATCA GCAAGACGCA ATTGGAATGG 
TTGTACGGAC GTTCGTAA 

 

Protein sequence

MSLDQRLQTT SLTIRADERV VLLGASGAGK TTLIKLCNGS LQPSRGALQW RGQPLKRLPR 
HERRSIGTFW QDLRLVEELS VVQNINSGAL GRHGLMWALR NLLGALEKDA CLAVMQEVHL 
EPSLLKRAVT ELSGGQRQRV ALARLLRQRP ELVLADEPLS ALDPVIARDV LDTLLSLPGC 
LISLHRPDLI HRFERVLGLR NGALVLDAAP DMISKTQLEW LYGRS