| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1182 |
|---|
| Symbol | |
|---|
| ID | 3743260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1148068 |
|---|
| End bp | 1149249 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637771362 |
|---|
| Product | aminotransferase class-I |
|---|
| Protein accession | YP_377190 |
|---|
| Protein GI | 78184755 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTGC GCCCCCCAGA ACTCTCCCAT CGGGCGATTG CCCTTAAGCC CTCGCTGACC
CTCGAGATCA GCGCCAAAGC CAAAGCGCTT AAGGCCGAAG GCCGAGATAT TTGCAGCCTT
AGTGCTGGGG AGCCTGATTT CAATACCCCA GGGTTCATCG TCGAGGCGGC AAGGGAGGCT
CTATCCCAGG GCATCACCCG TTACGGCCCA GCGGCGGGTG ATCCTGAGTT ACGAGCGGCT
CTCGCCGACA AACTCACCCA TGAAAACGAT ATTGCGACAA AGCCTGAGCA GGTTCTGATC
TGCAACGGCG GTAAACAAGC GATTTACAAC CTTTTCCAGG TGGTGCTGAA CCCCGGCGAT
GAAGTTTTAC TCCCTTCGCC CTATTGGTTG AGTTATCCAG AAATGGCTGC CCTGGCTGGT
GCCAGCACGG TGTTGATTCC ATCTTCAGCT TCTGATGGAT TCAGACTCGA TCTCGATGCT
TTGGAAGCAA GGATCACCCC CAAAAGCCGA CTTTTGGTGA TCAACAGTCC AGGGAATCCC
ACGGGTCGCG TCATGCAGCG ACAAGAACTC GAGGCTCTGG CTGAGCTGGT TGCTCGACAC
CCCAATCTCT TGGTGATGAG TGACGAAATC TATGAATATC TTTTGGCTGA GGGAGAGCAA
CACATCAGTT TTGCCTCCGT ATCGGAAGCG ATCAAGGATC GTTGCTTCAC GGTGAATGGC
TTCGCCAAGG GTTGGGCCAT GACTGGGTGG CGCCTGGGCT ACCTCGCTGG CAACGCGACG
GTGATCAAAG CGGCTTCAGC ACTACAAAGC CAAAGCACCA GCAATGTTTG CAGTTTTGCC
CAAAAAGGAG CGCTCGCTGC CATTCGTGGA TCGCGGGAGT GTGTTGCAGA TATGGCCTGC
AGCTACAACT TGCGGAGAAA TTTTCTGATC GAAGGACTGC AATCCATTCC AGGCATCACC
TTGATTCCTC CGAAAGGTGC GTTCTATGCC TTTCCGCAGC TGCCGGAGGG CATTACCGAT
TCGATGGAAT TTTGTCGTCG TGCTTTAGAA GACGAAGGCC TTGCCGTTGT GCCAGGTATT
GCCTTCGGAG ACGACCGCTG CATTCGTCTG TCGTGTGCCG TCTCGCATGA GAGCATCACA
AATGGTTTGG AACGACTGCA GCGGATGCTC AGCAAGTTCT GA
|
|---|
| Protein sequence | MILRPPELSH RAIALKPSLT LEISAKAKAL KAEGRDICSL SAGEPDFNTP GFIVEAAREA
LSQGITRYGP AAGDPELRAA LADKLTHEND IATKPEQVLI CNGGKQAIYN LFQVVLNPGD
EVLLPSPYWL SYPEMAALAG ASTVLIPSSA SDGFRLDLDA LEARITPKSR LLVINSPGNP
TGRVMQRQEL EALAELVARH PNLLVMSDEI YEYLLAEGEQ HISFASVSEA IKDRCFTVNG
FAKGWAMTGW RLGYLAGNAT VIKAASALQS QSTSNVCSFA QKGALAAIRG SRECVADMAC
SYNLRRNFLI EGLQSIPGIT LIPPKGAFYA FPQLPEGITD SMEFCRRALE DEGLAVVPGI
AFGDDRCIRL SCAVSHESIT NGLERLQRML SKF
|
|---|
| |