Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1178 |
Symbol | |
ID | 3743256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1144476 |
End bp | 1145810 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637771358 |
Product | peptidase S41A, C-terminal protease |
Protein accession | YP_377186 |
Protein GI | 78184751 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCG GTAATCTGAA CGCACAGACT GAAGACAAGA CGGATATGGC TAAGTCAGTG AAGTGGCGAT CGTTTCTTCG CACAACACCT CTACTGCTAA TTCTCGGTTT AGGTGGCGTC ACCACTGCTA TCACTCTGGG CGCGCCAGGG TTCACCCTTC CGAGTGCTAG CGGTGGATCG ATTAGCGATA GCCCTAAAGA GGTGATCGAT CAGGTTTGGC AGATCGTCTA TCGGGATTAC CTTGATTCAA GTGGTGACTA TGATGAATCG TCATGGCGAC AATTACGTCG CGATCTCCTA AAAAAATCTT TCGCCGGAAG CGCTGAGTCC TACGAAGCAA TTCGTGGAAT GCTTGCAAGC TTGAATGATC CATATACCCG TTTCCTTGAT CCAAAACAAT TCAAGGAAAT GCGAATTGAT ACGTCCGGTG AACTGATGGG AGTAGGCATT CAATTGAGTC TTGACAAAGC AACTAAAAAA TTAGTTGTTG TATCTCCAAT TGAAGGAACT CCTGCATCAC GAGCAGGGGT TCTTTCTAAG GATGTGATTG TTTCTATCGA TGGCAAGTCC ACAGAAGGAA TGAACACTGA GGATGCTGTT AAGTTAATTC GTGGGCCGGA AGGGTCAGCA GTAATTTTAG GTCTTCGCCG TGGTGATGAA CTAATAGATG TTCCTTTGAC GCGTGCCAGA ATAGAGATTA ATGCTGTTTC CTACAAGCTA AATACTACGC GAGATCAACA TAAAGTTGGA TATATTCGCC TCAAGCAATT TAATGCAAAT GCAGCAAAGG AAATGCGCGA AGCAGCAAAG GCGCTTGAGG CGCAAGATGT TGATGGTTAC GTACTGGATT TGCGGGGCAA TCCCGGAGGA TTATTAGAAG CAAGTATTGA TATAGCTCGC CAATGGTTGA ACGAAGGAAT CATTGTGAGT ACACGAACGA GAGAAGGTAT TCGTGATGTC CGACGCGCTA CAGGTAGTGC CATCACAGAT AAGCCCTTGG TTGTTTTAAT TGACCAAGGC TCAGCCAGTG CTAGTGAAAT CCTGTCTGGC TCATTGCAAG ACAATGGTCG AGCTCAATTG GTTGGTCAGA AAACGTTTGG CAAAGGGTTA GTACAGGCTG TGCGTGGATT ATCTGACGGC TCTGGTTTGA CGGTGACAAT CGCTAAATAT CTCACTCCGA AGGGAACGGA TATTCACAAA AACGGTATCG AACCAGATAT CAAGTCTGAG ATGAGTGAAA AGCAGTTAAA AGGTTTTACG ATTGAAAAGT TAGGTACAAG TCAAGACTCT CAATATATTG ACGCAAAAAA CGAACTGATT AAAAAAATAA ATTAA
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Protein sequence | MKLGNLNAQT EDKTDMAKSV KWRSFLRTTP LLLILGLGGV TTAITLGAPG FTLPSASGGS ISDSPKEVID QVWQIVYRDY LDSSGDYDES SWRQLRRDLL KKSFAGSAES YEAIRGMLAS LNDPYTRFLD PKQFKEMRID TSGELMGVGI QLSLDKATKK LVVVSPIEGT PASRAGVLSK DVIVSIDGKS TEGMNTEDAV KLIRGPEGSA VILGLRRGDE LIDVPLTRAR IEINAVSYKL NTTRDQHKVG YIRLKQFNAN AAKEMREAAK ALEAQDVDGY VLDLRGNPGG LLEASIDIAR QWLNEGIIVS TRTREGIRDV RRATGSAITD KPLVVLIDQG SASASEILSG SLQDNGRAQL VGQKTFGKGL VQAVRGLSDG SGLTVTIAKY LTPKGTDIHK NGIEPDIKSE MSEKQLKGFT IEKLGTSQDS QYIDAKNELI KKIN
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