Gene Syncc9902_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1132 
Symbol 
ID3743268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1097086 
End bp1098087 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content55% 
IMG OID637771312 
ProductDnaJ domain-containing protein 
Protein accessionYP_377140 
Protein GI78184705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCCG AGGAGTCCAA CCATCAGCAA AAAATTACCG TCACCCTGTC GAAACGGTTG 
GTGACGCTGA TTGATCAACT CAAGCGTGAG TATGGCGTTC GCTCGAGGGG CCTCGTTCTG
GAGTCAGTTC TCGAACAATT GATTCAGCCG GAGGATCAGT CGGATCTGTT GGATCCAACG
TCCCCTGACA CCGCTGTGGT CTCCCCTGAG GTGCCACCCC CAGAGGCAAG CAGTTTGGTG
CTGATCCGCG CCACGGAAGC GGATACAACG TTTGATGAGC CTGAACCTCA GCTGCAACAA
CAAAGTTCTG TTGGTATTGA TTTGCCAGGG TTCGTGAGCC GTCGAACGAC GCAACTTCGC
GACACGCTCG CCCAGCGTTC TGACAACGAT CCATCGGACA AATCCGCGTC GGGCGATCCT
CTGCTGTCTT CGGTGTCTCA CGCTGATTTA ATCGCTGCCA CCGAAGCCGT TGATGAACAT
TGGCGTTCCC TTTATGGACA ACCGCCTGGC GACACCGTTG TGGAAGCATC GATGCTTTGG
CTGGCACGGG ATGTTTGGTC GACGACAGAT GCCAGTGATG GCAGACCATT TACATGGTCT
GCTGCAAATT CCTCAATGAG GGAACTCTGT TCTGACTGGG AGCAAGGTGA TCCTTCGCTC
GGGCGCGTGA TGGTGGTGGC TGGAACCCTG GAAGATCCTT TTGCAACGGC TTCTTTGGCC
GACCGCATGC CGACGTTGAT ACGGCGATTT GTGAATCGCT TTCGTCGCAG CCGTCAGGTC
ACGTCCTTTG AAACACTTGA GTCCACCATG ACCGTGCATG GTGCACTCAA GCTTTTGGGT
TTATCGACTA CCGCTGGAGC GAGTGTGACG TTGGCCTCCA TTCGAGAGGC ATTTAAGGCA
CGTGCACGCG ATGTTCATCC TGATGCTGGA GGGTCTACCG ATGCCATGCG TCGACTCAAT
GAGGCCTATC GACTGCTTCG AGAGTTGTAC CGCAATCGCT AA
 
Protein sequence
MSAEESNHQQ KITVTLSKRL VTLIDQLKRE YGVRSRGLVL ESVLEQLIQP EDQSDLLDPT 
SPDTAVVSPE VPPPEASSLV LIRATEADTT FDEPEPQLQQ QSSVGIDLPG FVSRRTTQLR
DTLAQRSDND PSDKSASGDP LLSSVSHADL IAATEAVDEH WRSLYGQPPG DTVVEASMLW
LARDVWSTTD ASDGRPFTWS AANSSMRELC SDWEQGDPSL GRVMVVAGTL EDPFATASLA
DRMPTLIRRF VNRFRRSRQV TSFETLESTM TVHGALKLLG LSTTAGASVT LASIREAFKA
RARDVHPDAG GSTDAMRRLN EAYRLLRELY RNR