| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1127 |
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| Symbol | |
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| ID | 3743087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1091948 |
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| End bp | 1092676 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637771306 |
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| Product | CsgA C-factor signaling protein |
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| Protein accession | YP_377135 |
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| Protein GI | 78184700 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.596754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCCTC AGAATCCGGA AGCATGGAGT GGACTTGCTC TTGTTTGTGG GGCAGGGGGC
ATCGGCAGGG CCATGGCCTC TGAGCTGAAG AAGCAATGTC CCGAACTCTC TGTTCTGACG
GCGGGCCGTG GGGAGCAACA CGGCTATGAC TTGCTATTGG ATTTGGAGTC AGACCACGAC
CTGAATCATC TCAGTGAGGA ACTCTCGACG AGGAACAAAC CGCTCCGATT GGTGATCAAC
TGCAGTGGAC GTTTGCATGG TCCGCACTTG CAGCCAGAGA AACGTCTCAA ACAAGTGGAG
CGTCGTCAGC TCCTGGAACA GTTCTCGATC AATTCCATTG CCCCTGTGCT TTTGGCTCAA
GCGATCGAGC CGCTTTTACG CCGAGACCAA CCGTTTCATT TCGCGAGCCT GAGTGCACGG
GTGGGAAGTA TTGGAGATAA CCGGAGCGGC GGTTGGTATG CGTATCGAGC CGCAAAAGCG
GCTCAGAATC AACTGTTGCG CTGCTTGAGC ATCGAGTGGG CTAGGCGATG GCCAATGGCC
ACGGTGACGC TTCTTCACCC TGGGACGACG GACACCGATC TCTCCAAACC ATTTCAATCC
TTCGTACCAA CAGAACAACT TTTCAGTCCA CAGAGGGCTG CGGAGCAACT CGTTGCGCTG
CTGCTCAAGC AGACCCCAGA GCAAAGCGGG GCATTTTTAG CCTGGGATGG TCAGTCGATC
GACTGGTGA
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| Protein sequence | MHPQNPEAWS GLALVCGAGG IGRAMASELK KQCPELSVLT AGRGEQHGYD LLLDLESDHD
LNHLSEELST RNKPLRLVIN CSGRLHGPHL QPEKRLKQVE RRQLLEQFSI NSIAPVLLAQ
AIEPLLRRDQ PFHFASLSAR VGSIGDNRSG GWYAYRAAKA AQNQLLRCLS IEWARRWPMA
TVTLLHPGTT DTDLSKPFQS FVPTEQLFSP QRAAEQLVAL LLKQTPEQSG AFLAWDGQSI
DW
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