| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1123 |
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| Symbol | |
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| ID | 3743083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1087252 |
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| End bp | 1090878 |
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| Gene Length | 3627 bp |
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| Protein Length | 1208 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637771302 |
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| Product | 5-methyltetrahydrofolate--homocysteine methyltransferase |
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| Protein accession | YP_377131 |
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| Protein GI | 78184696 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00712875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGTGA CACAAGCAAA AGCTCCTGTC ACTGCCTCCC GCTTTCTCGA TTACATCCAC
GGCCCAACCC GTCCGGTTTT GGTGTTTGAC GGAGCAACAG GAACCAGCCT TCAGGATCAA
GGCCTAACAG CAGAAGACTT TGGCGGCCTC GACTTGGAGG GTTGCAACGA GAACTTAGTG
ATTACTCGCC CAGATGCTGT TCAGGCGGTG CATCGGCAAT TTTTAGACGT GGGCTGCGAC
GTGATCGAAA CCGACACGTT TGGGGCAGCC TCCATCGTTC TTGCTGAATA CGGTCTTGAA
GATCAGGCCT TTGAACTCAA CCGTCGTGCT GCGCAGCTGG CCCGCGACGT TGCTGATGAG
TACAGCACGC CGGAAAAACC ACGATTCGTG GCCGGATCCA TGGGGCCAAC AACCAAGTTG
CCAACACTCG GCCACATCGA ATTCGACACG ATGCGTGATG GCTTCCGTGA GCAGGCGGAA
GGACTTATTG CTGGAAACGT CGATCTGATC ATTGTCGAGA CCTGTCAGGA CGTATTGCAA
ATCAAAGCTG CTTTGCAGGG TATTGAGGCC GCCTTTGAGT CCTGTGGCGA ACGGCGTCCA
CTCATGGTGT CCGTCACCAT GGAGACGACA GGAACCATGT TGGTGGGCTC TGATATTGCC
GCTGTGGTGG CAATTTTAGA ACCGTTTCCC ATTGACATTT TGGGACTTAA TTGTGCAACG
GGTCCTGAGC AAATGAAGGA GCATATCCGC TACCTCTCGG AGAATTCTCC TTTCATTGTG
AGCTGCATAC CCAATGCAGG TCTTCCCGAA AATGTCGGTG GAGTTGCCCA CTACAGACTC
ACGCCCACCG AATTGAAGAT GCAAATGATG CACTTCGTTG AAGACCTTGG AGTGCAAGTC
ATTGGAGGTT GTTGCGGTAC AACTCCAGCT CACATCGGCT CCTTGGTGGA GTTGGCCCTT
GAACTCAAGC CTGCGGAGCG ACTATCTCGA TCTAAAGATC AGAAGGATGA TGTTCGCCCA
AGTTTTGATT ATGAACCTTC GGCAGCCTCT ATTTATGGTG TTACTCCTTA CCATCAAGAC
AATTCGTTTT TAATTATTGG TGAGCGCTTG AATGCAAGCG GGAGTCGCAA AGTTCGCGAG
CTCCTGGCTG AGGAAGATTG GGACGGCCTT GTGGGTGTTG CCCGTGGCCA GGTCAAAGAA
AATGCCCATG TTCTCGATGT GAATGTGGAT TATGTGGGCC GTGATGGCGA AAAAGATATG
AATAATTTGG TGAGTCGTCT GGTCACCAAT GTGAATCTTC CTTTGATGCT TGATTCCACT
GAATGGCAGA AAATGGAAGC TGGCTTAAAA GTTGCCGGTG GTAAATGCAT TCTCAACTCC
ACCAACTACG AAGATGGCAA CGAACGTTTT TTCAAGGTTC TAGAGCTAGC CCGCCGTTAT
GGCGCTGGAG TTGTTGTGGG AACCATCGAT GAAGATGGCA TGGCGAGAAC TGCCGAAAAG
AAATTTGCGA TTGCTCAGCG CGCCTATCGC GACGCATTGG AATTTGGGAT ACCCGCCCGT
GAGATTTTCT ATGACCCTTT AGCGCTTCCA ATTTCGACGG GCATTGAGGA AGATCGATTA
AACGCCAAGG CAACAGTTGA TTCAATTCGG ATGATCCGGG AGGGCCTTCC CGGAGTCCAT
GTTGTTCTAG GGGTGAGCAA TGTGAGTTTC GGACTATCTC CTGCTGCACG GATTAATCTC
AATTCTGTGT TTCTACACGA CTGCTGCGAA GCAGGAATGG ATGCTGCCAT TGTTAGCCCT
GCCAAGATTC TTCCCTTGGT CAAAATCAGT GATGAACACC AACAAGTCTG TCGCGATTTA
ATCAACGATA ATCGTCGTTT TGAAGACAAA ATTTGTGTTT ACGATCCTCT CACTGAACTG
ACAAAATTAT TCGAGGGCGT CTCCGCCAAA GAAGCTCGTG CTTCGGGCCC TTCGCTGTCC
GATCTTCCGA TTGAGAAGCG TTTAAAGCAG CACATTATTG ATGGCGAACG GATTGGATTG
GAGCCTGCTC TGGACCAGGC CATGAATGAC TATGCCCCCC TTCACATCAT CAACACTTTT
TTGTTGGATG GAATGAAGGT GGTGGGCGAA TTGTTTGGTA GCGGTCAGAT GCAGCTTCCA
TTTGTTCTTC AGAGTGCTGA AACAATGAAA TCTGCAGTGG CGCATCTTGA GCCTCATATG
GAAACTTTAG AGGGTGAAAG TACAAGTAAA GGAAAATTCT TGATTGCTAC AGTTAAAGGG
GACGTTCACG ATATTGGTAA GAACCTTGTC GATATTATTC TTACGAATAA TGGTTATGAA
GTTGTCAACC TTGGAATCAA GCAAAGCTGC GATGCCATCG TTGATGCGCA AAAAGAGCAT
CAGGCAGATT GTCTTGCCAT GAGTGGTTTG TTGGTGAAAT CAACTGCGTT CATGAAAGAC
AATTTATCGG CTTTCAATGA AGCAGGTATT GATGTTCCTG TGATTCTTGG CGGCGCTGCT
CTAACACCCC GTTTCGTACA AAAGGATTGT CGTGATGTTT ACAACGGAAA AGTGATTTAT
GGGCGAGATG CATTTGCGGA CTTGAGATTT ATGGATGCGT TGATGGATGC CAAAAAGAAA
GATAATTGGA GCAATTTGTC TGGATTTTTG GCGGATGCCC CAGAGGGTGT CGGACTTGAT
GAGGCGACGC CTAACGACTC CGATCAGGCC TCCGCTCCGG CGGAGGCTTC TGAACCAGAG
CAGCCACAAA GCCAACAGCC GGTTTCAACG GAACGTTCCA GCGCCGTGCC ACCAGAGCCA
ATTCCTGTGG CTCCATTCCT TGGTTCAGCG GTTTTAACCG AAGCGGATTT GGATCTCCAA
GAGGTGTTCA CCTATCTCGA CCGCAACGCT CTCTTTGCGG GCCAGTGGCA GTTCCGTAAG
ACCAAGGATC AGAGTCGAGA CGACTACGAC GCGATGCTCG CTGAAAAAGC TGAGCCCGTG
CTGCAGCTTT GGATCGATCG CTGCCTGAAT GAATCTCTCC TCGCTCCTGG AGCTGTTTAT
GGCTATTTCC CTGTGGGTCG GGATGGGAAT GCTCTGAGAG TGTTCTCAGC CGATAAAACA
ACGGAACTCG GACGCTTTGA TCTGCCACGC CAACGGTCCG GGAATCGCTA TTGCATCGCT
GATTTCTTTT CTGATGTGTC GGCTGATGGG GCACCCACCG ATGTATTGCC AATGCAGGCG
GTCACCATGG GCGAAAAGGC CAGCATCGTG GCTCAGGAGC TGTTTAAAGG CGACCAATAC
AGCGATTACC TCTACTTCCA TGGTCTGGCG GTCCAGATGG CCGAGGCGCT GGCTGAGTGG
GTTCACGCAC GGATTCGCCA GGAACTGGGC TTTGCTGATC CGACTGGCAT GCCTTTGCGT
GATGTCTTGG CACAGCGATA TCGAGGTAGT CGCTATTCCT TCGGATACCC AGCGTGTCCA
AATGTCGCCG ACTCTCGTCA GCAACTCCTC TGGCTGGATG CCGATCGCAT TTGTCTCACG
ATGGATGCCA GCGACCAGTT GTCGCCAGAA CAAAGCACGA CAGCTCTGAT TGCTCTCCAC
AGCAAAGCTC GCTACTTCAG TGCGTGA
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| Protein sequence | MVVTQAKAPV TASRFLDYIH GPTRPVLVFD GATGTSLQDQ GLTAEDFGGL DLEGCNENLV
ITRPDAVQAV HRQFLDVGCD VIETDTFGAA SIVLAEYGLE DQAFELNRRA AQLARDVADE
YSTPEKPRFV AGSMGPTTKL PTLGHIEFDT MRDGFREQAE GLIAGNVDLI IVETCQDVLQ
IKAALQGIEA AFESCGERRP LMVSVTMETT GTMLVGSDIA AVVAILEPFP IDILGLNCAT
GPEQMKEHIR YLSENSPFIV SCIPNAGLPE NVGGVAHYRL TPTELKMQMM HFVEDLGVQV
IGGCCGTTPA HIGSLVELAL ELKPAERLSR SKDQKDDVRP SFDYEPSAAS IYGVTPYHQD
NSFLIIGERL NASGSRKVRE LLAEEDWDGL VGVARGQVKE NAHVLDVNVD YVGRDGEKDM
NNLVSRLVTN VNLPLMLDST EWQKMEAGLK VAGGKCILNS TNYEDGNERF FKVLELARRY
GAGVVVGTID EDGMARTAEK KFAIAQRAYR DALEFGIPAR EIFYDPLALP ISTGIEEDRL
NAKATVDSIR MIREGLPGVH VVLGVSNVSF GLSPAARINL NSVFLHDCCE AGMDAAIVSP
AKILPLVKIS DEHQQVCRDL INDNRRFEDK ICVYDPLTEL TKLFEGVSAK EARASGPSLS
DLPIEKRLKQ HIIDGERIGL EPALDQAMND YAPLHIINTF LLDGMKVVGE LFGSGQMQLP
FVLQSAETMK SAVAHLEPHM ETLEGESTSK GKFLIATVKG DVHDIGKNLV DIILTNNGYE
VVNLGIKQSC DAIVDAQKEH QADCLAMSGL LVKSTAFMKD NLSAFNEAGI DVPVILGGAA
LTPRFVQKDC RDVYNGKVIY GRDAFADLRF MDALMDAKKK DNWSNLSGFL ADAPEGVGLD
EATPNDSDQA SAPAEASEPE QPQSQQPVST ERSSAVPPEP IPVAPFLGSA VLTEADLDLQ
EVFTYLDRNA LFAGQWQFRK TKDQSRDDYD AMLAEKAEPV LQLWIDRCLN ESLLAPGAVY
GYFPVGRDGN ALRVFSADKT TELGRFDLPR QRSGNRYCIA DFFSDVSADG APTDVLPMQA
VTMGEKASIV AQELFKGDQY SDYLYFHGLA VQMAEALAEW VHARIRQELG FADPTGMPLR
DVLAQRYRGS RYSFGYPACP NVADSRQQLL WLDADRICLT MDASDQLSPE QSTTALIALH
SKARYFSA
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