Gene Syncc9902_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1118 
Symbol 
ID3743078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1080687 
End bp1081259 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content53% 
IMG OID637771297 
Producthypothetical protein 
Protein accessionYP_377126 
Protein GI78184691 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.741307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTC CTCCTGAGGC TTACCTCTGG TTCAAAACAC TCCACATCGT TGGTGTGGTG 
GTGTGGTTTG CAGGATTGTT CTATTTGGTT CGCCTGTTCA TCTATCACGT TGAAACGGCA
GAGCTAGAAC CCTCTCTGCA ACAGCCGTTT CGAGATCAGT ACACGCTGAT GGAAAAACGT
CTGGCCAACA TCATCACCAC CCCTGGGATG GTCGTTGCAG TGACGATGGC CATTGGACTG
CTGGTGGCCC AGCCGAGTTG GCTCCAGCAG ACGTGGATGC ACGCCAAGCT TGCCTTTGTG
GCGGCCCTTT TGGGATATCA CTTTTTCTGT TATCGCCTGA TGGGACAGCT GCACGCCGGC
AGCTGTCAAT GGTCTGGAAA GCAGTTGCGT GCTCTGAATG AGCTCCCCAC ATTGCTGTTG
GTGATTGTTG TGATGTTGGT GGTCTTTAAA TCTCAGTTCC CAACGGGTGC TGCGACTTGG
TTCATCGTTG CATTGGTGGT GTTTATGGCC GGTTCAATCC AGTTTTATGC CCGTTGGAGA
CGTCTGCGGG CTGAGGCAGC ATCGGAGCTG TGA
 
Protein sequence
MTLPPEAYLW FKTLHIVGVV VWFAGLFYLV RLFIYHVETA ELEPSLQQPF RDQYTLMEKR 
LANIITTPGM VVAVTMAIGL LVAQPSWLQQ TWMHAKLAFV AALLGYHFFC YRLMGQLHAG
SCQWSGKQLR ALNELPTLLL VIVVMLVVFK SQFPTGAATW FIVALVVFMA GSIQFYARWR
RLRAEAASEL