| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1102 |
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| Symbol | |
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| ID | 3743316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1061985 |
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| End bp | 1063682 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637771278 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_377110 |
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| Protein GI | 78184675 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0587047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGATT CGGTTCGGAT TCGACTCGAC TTAACCCAAC CTTCTAGTCA GACGGTTTTG
GTCCACATGG AGTGGACGCC CCAGTGGAAT CGCCAAATTC TTCAGTTACC CGTTTGGACG
CCAGGGTCCT ACACCGTTCG AGATCACGCT CAACACCTTC ACAGTCTTCG GCTGAGCAAT
GGTTCAACGG CTCAAAAGGT TCGTCGTTTG TCCCCGAGTC GTTGGGTGTG CGAGCTAACA
ACGCTTGAAC CGCTCACTCT GACCTACGCG ATTGAATCCC GGGACCTCAC GGTGCGGACT
GGCTTGTTGG ACCCGGATTT TGCTTCCCTC AGTCTGGCTT CAGTGGCGAT GGAGATCGAG
GGCTTTCGTT GGATGCCCCA TCACTTGGAG GTGTCAGCTC CTTCGCACTG GCAAGTGCAT
CTCCCCCTCG AATCGTCAGT TCTTGGTTGG CTTGCCAAGG ATTTCGATGC CCTGATCGAT
ACCCCGTTGC ATGCCGGTCC GTTTGCGGTC AAACCGTTCA CCGTTCATGG ACATCGGCAT
GAACTTCTCT TAATTGGCGC TCCACCTTCG GGTTGGCCGG AGAGCTTCAT GTCGGACATC
GAGCGCGTTT GCCAGGCCAC TTGCGATCTG ATGGGGACGC CTCCCCCCGC CGGGGATCGC
TACCAACTGG TTCTTCAACT TCTCGAAAAG GGTTACGGCG GTTTGGAGCA CGACCACAGT
GCCGTTCTGC AATTCAATTG GTCAGCCCTC GCCAGCAAAA AGGGATACCG GCAGTTGCTT
CAGCTGATTG GCCATGAGTA CCTGCACCAG TGGAATGTTC GGCGGCTTCG TCCCGTCGAG
TTGCGCCCCT ACGACTACTC ACAACCAGTG ATCTGCGAGG GGTTGTGGTT CGCTGAGGGC
ATCACGAGCT ACTACGACCT CTTTCTTCCA CTGAGGGCTG GATGTACAGA TCAGTCCATG
CTTTTGGAGG ACTTCGGAGA GGAGCTGTCC AGTGTGCTGA TGTCGCCTGG ACGGTCGATT
CAATCCCTAG CGATGAGTGC AGAAGAGGCC TGGGTGAAGC TGTACAAGGC CACACCAGCA
TCACGCGACA CCCAAATCAG CTATTACCGC CTTGGGGCCG CGGTGGCTTT TTGTCTGGAC
GTCCGCCTAC GAAGTTTCGG CACATCCCTT CCCGTGTTGC TTCGCCATCT GTGGAGCTCA
TTGGGCGAAC ACCATCGTGG GTTTTGCAGA GACGACCTCC ACCAGTGGCT TGCATCAGTG
GACAACGGAC TACCCGCAGA ACTGGACCAC TGGCTTGATG ACACAAACGC GGTTCCGCTG
GAGAAATCTG CTGAGCTCAT CGGTCTGCGC TTGGAGGCCG TTCCACAAAA GGCCCCCCAT
CATGGTTTGA CCCTGAAAGC TTCAGCCGGC GATCTGGTGG TTCAGCGGGT CATGAAGAAC
AGCCCAGGCA TGAAGGCCGA TTTGGTTGTT GGAGACGAAA TCTTGGCGAT CAATGGTTTC
CGTGTCCGTT GCATCGACTC CGTTGCTGAT CTCATGCGTA ACTCCTCTGA AGTTCAAGTG
TCTTTTGTGC GTCGGGGCTT GATGAAGGAA ACATTCCTGC AGCCTGAATC CGCCATTGAG
ACTTGGCGAT TGGAAGTCGA TCCTCAGGCG TCTTCTGATC AGCTGGCTTT ACGAGAGCAA
TGGTTCAAAA TTTTCTGA
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| Protein sequence | MSDSVRIRLD LTQPSSQTVL VHMEWTPQWN RQILQLPVWT PGSYTVRDHA QHLHSLRLSN
GSTAQKVRRL SPSRWVCELT TLEPLTLTYA IESRDLTVRT GLLDPDFASL SLASVAMEIE
GFRWMPHHLE VSAPSHWQVH LPLESSVLGW LAKDFDALID TPLHAGPFAV KPFTVHGHRH
ELLLIGAPPS GWPESFMSDI ERVCQATCDL MGTPPPAGDR YQLVLQLLEK GYGGLEHDHS
AVLQFNWSAL ASKKGYRQLL QLIGHEYLHQ WNVRRLRPVE LRPYDYSQPV ICEGLWFAEG
ITSYYDLFLP LRAGCTDQSM LLEDFGEELS SVLMSPGRSI QSLAMSAEEA WVKLYKATPA
SRDTQISYYR LGAAVAFCLD VRLRSFGTSL PVLLRHLWSS LGEHHRGFCR DDLHQWLASV
DNGLPAELDH WLDDTNAVPL EKSAELIGLR LEAVPQKAPH HGLTLKASAG DLVVQRVMKN
SPGMKADLVV GDEILAINGF RVRCIDSVAD LMRNSSEVQV SFVRRGLMKE TFLQPESAIE
TWRLEVDPQA SSDQLALREQ WFKIF
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