Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1068 |
Symbol | |
ID | 3742491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1028920 |
End bp | 1030449 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637771244 |
Product | threonine dehydratase |
Protein accession | YP_377076 |
Protein GI | 78184641 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGATT ACCTGCAAAA GATCCTCCGA GCACGTGTTT ACGACGTGGC CAGGGAAACC CCTCTTGATC CAGCTCCCAA CCTCAGCCAG CGGCTCAACA ATCAGATTTG GTTGAAACGA GAAGACCTAC AGCCGGTGTT TTCGTTCAAG CTTCGAGGCG CCTACAACCG CATGGTGCAA CTCCCCGTTG AGGATCTTCA ACGCGGCGTG ATCGCATCCA GTGCAGGCAA CCACGCCCAA GGAGTGGCTC TCAGTGCGCG CCGTTTGGGT TGCAGGTCGG TGATTGTGAT GCCCAAAACA ACTCCCGAAG TCAAAATCCG CGCCGTCCGT GCCTTAGGCG GCGAAGTGGT TTTGCACGGC GAGACCTACG ACGAATGCTC GGCGGAAGCG CAAAAGCGTT GTGAAGCTGA AGGATTGACC TACATCCACC CCTTCGACGA CCCAGAGGTC ATCGCTGGTC AAGGCACGAT TGGCATGGAA ATCATGCGAC AAAGCAAAGA ACCACCGGAT GCGATTTACG TCGCCGTTGG TGGAGGGGGA TTGATCGCCG GAATTTCGGC CTACGTGAAG CAGCTTTGGC CAGAAACAGA AGTGATCGGA GTCGAACCCA TTGATGCCGA TGCGATGACC CAATCCCTGC GGTGCGGACA TCGCGTGGAG TTGGAGAAAG TGGGTTTATT TGCCGATGGC GTCGCCGTTC GAAAGGTTGG TGAGCACACC TTTGATCTGG CTCGTCGCTA TGTGGATCGC ATGGTGACCG TGGACACCGA TGCCATTTGT GCCGCCATCA AAGACGTCTT TGAGGACACA CGATCAATCC TTGAACCAGC TGGAGCGCTT GCGATCGCTG GTTTGAAACA GGATGTGGCT GATCGAAACC TCGAAGGGAA GCGTCTTGTT GGGGTGGCCT GCGGGGCCAA CATGAATTTC GAACGATTGC GCTTCATCGC AGAGCGGGCT GAGCTCGGTG AGGAGCGAGA AGCGATGTTT GCCGTGGAAA TCCCCGAGTC GACAGGAAGT CTTCGTGCGT TGTGTCGATG TTTAAGCGAC CGCAGCCTCA CCGAATTCAG TTATCGAATG ACGGAGGGAG TGCGCGCCCA AATCTTCATT GGAGTTCAGG TCAACAATCA GCAAGACCGC TTCGCCCTCG TCGAGCATCT GTCCAACAAC GGGTTCCCCT GCCTTGATTT GAGCGACAAC GAGTTTGCGA AAGTTCATTT GCGACACATG GTGGGTGGAC GACTACCGAA ATCAGCTCGC GAGGCCTGCG CGGGGGACTG CAGCGAATTG CTTTATCGCT TCGAGTTTCC AGAACGACCC GGTGCGCTGA TGAATTTTGT GACGTCGCTT CATCCCAGTT GGAGCATCAG CATTTTTCAC TATCGAAACC ACGGCGCCGA CACCGGCCGA ATCGTGGTGG GCGTTTTGAT TCCTAAGACT GAAATGGACG GTTGGACCAG CTTTCTAAGT GCGTTGGGTT ATGCCTTTTG GGAAGAAAGT AAGAACCCTG CTTACAGCCT GTTCCTGTGA
|
Protein sequence | MTDYLQKILR ARVYDVARET PLDPAPNLSQ RLNNQIWLKR EDLQPVFSFK LRGAYNRMVQ LPVEDLQRGV IASSAGNHAQ GVALSARRLG CRSVIVMPKT TPEVKIRAVR ALGGEVVLHG ETYDECSAEA QKRCEAEGLT YIHPFDDPEV IAGQGTIGME IMRQSKEPPD AIYVAVGGGG LIAGISAYVK QLWPETEVIG VEPIDADAMT QSLRCGHRVE LEKVGLFADG VAVRKVGEHT FDLARRYVDR MVTVDTDAIC AAIKDVFEDT RSILEPAGAL AIAGLKQDVA DRNLEGKRLV GVACGANMNF ERLRFIAERA ELGEEREAMF AVEIPESTGS LRALCRCLSD RSLTEFSYRM TEGVRAQIFI GVQVNNQQDR FALVEHLSNN GFPCLDLSDN EFAKVHLRHM VGGRLPKSAR EACAGDCSEL LYRFEFPERP GALMNFVTSL HPSWSISIFH YRNHGADTGR IVVGVLIPKT EMDGWTSFLS ALGYAFWEES KNPAYSLFL
|
| |