Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1061 |
Symbol | |
ID | 3742484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1022496 |
End bp | 1024424 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637771237 |
Product | peptidase M41, FtsH |
Protein accession | YP_377069 |
Protein GI | 78184634 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.498037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGC GCTGGCGCCT CCTTGCCCTA TGGCTTTTGC CGATTGGCGT TGTGCTGCTG ATCGGCTGGC AGGTCCTTAG CAACGGCGGG ATGAATGGCA TGAGCCAAAA CAACGGTGGT GGCAACAGCC CCACGGTTGC TCCGCGTAAC GCCGCTGTCG CGAGGATGAG CTACGGCCGT TTCCTGGATT ACGTGGAAGC AGGTCGCATC ACGGCTGTTG ATATCTACGA CGGTGGTCGT AATGCCGTAG TTGAAGCTGT CGATCCAGAT TTAGATAACC GCGTCCAGCG TTTACGCGTC GATCTCCCAG GTTTAGCCCC TGAGTTGATC AACACCTTGA AGGAAGAAGG CATCAGCTTT GATGTGCACC CCCCCAAGAG CACTCCGCCA GCGCTGGGTC TTTTGGGCAA TTTGTTGTTC CCATTGCTGC TGATCGGATC CCTGATCTTT TTGGCTCGCC GCAATAGCAA CATGCCCGGC GGCCCTGGTC AGGCCATGCA ATTTGGCAAG AGCAAGGCCA AGTTCATGAT GGAAGCCGAG ACCGGCGTGA TGTTCGACGA CGTTGCTGGC GTCACAGAAG CCAAGCAAGA ACTCGAAGAG GTTGTCACGT TCCTGAAGCA GCCTGAACGC TTCACATCTG TCGGAGCTCA AATCCCTCGG GGACTCCTAC TTGTCGGACC TCCAGGTACT GGCAAAACGT TGTTAGCCAA AGCCATTGCC GGAGAAGCTG GAGTTCCGTT CTTTGCCCTG TCGGGTTCTG AGTTTGTTGA AATGTTTGTT GGCGTTGGTG CCAGCCGTGT GCGCGATCTG TTCAAAAAGG CCAAAGAAAA CAGTCCTTGC TTGATTTTTA TTGATGAGAT TGATGCCGTT GGTCGTCAAC GCGGCGCTGG TGTCGGCGGT GGCAACGACG AGAGAGAACA AACTCTCAAC CAACTCCTCA CAGAAATGGA TGGTTTCGAA GGAAATAATG GAATCATCAT TATCGCGGCA ACAAACCGTC CTGATGTTCT TGATTCGGCG TTATTGCGTC CAGGTCGATT TGATCGTCAA GTCACTGTTG ATGCACCAGA TATCAAAGGT CGCCTTGCCA TTCTTGCTGT CCACTCTAAA AATAAGAAAC TCGATGGTGA ACTATCACTT GAAAGTATTG CTCGACGTAC TCCTGGTTTC ACGGGTGCAG ATCTCGCCAA CTTGATGAAC GAGGCGGCAA TCTTGACGGC ACGCCGCAGA AAGGAATCAA TTGGTCTGAG TGAAATTGAT GATGCTGTTG ACCGCATCAT CGCTGGCATG GAAGGTCGTC CTCTCACCGA TGGACGCAGC AAGCGGCTAA TTGCTTATCA CGAAGTGGGT CATGCACTTA TCGGAACTCT GGTCAAAGCC CATGACCCTG TCCAAAAAGT CACCCTTGTG CCCCGCGGCC AAGCCCAAGG CCTGACCTGG TTCTCTCCGG ACGAAGAGCA AACCCTAGTG ACCCGCGCCC AGCTCAAGGC ACGCATCATG GGTGCCCTGG GTGGTCGTGC TGCCGAAGAC GTGGTGTTTG GTTCCCAGGA AATCACCACC GGTGCCGGTA GCGACATCCA ACAGGTCGCC TCGATGGCCC GCAATATGGT GACGCGGCTT GGCATGAGTG ATCTTGGACC TGTTGCCCTT GAGGGCGGTG GTCAGGAAGT CTTCCTTGGT AGAGATTTGA TGTCTCGCAG TGAAATTTCC GAATCGATTT CTCAACAGGT GGATACACAA GTTCGCAGCA TGGTTAAGCG CTGTTATGAA GAAACTGTTG CCCTCGTTGC AGCCAACCGA GAAGCAATGG ACCAATTGGT TGAAATATTG ATTGAGAAAG AGACAATGGA TGGCGACGAA TTCAAATCAA TCGTTGCTGA ATTCACTTCA GTCCCTGAAA AGGACCGCAC AGTGCCAATT CTGAACTGA
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Protein sequence | MNQRWRLLAL WLLPIGVVLL IGWQVLSNGG MNGMSQNNGG GNSPTVAPRN AAVARMSYGR FLDYVEAGRI TAVDIYDGGR NAVVEAVDPD LDNRVQRLRV DLPGLAPELI NTLKEEGISF DVHPPKSTPP ALGLLGNLLF PLLLIGSLIF LARRNSNMPG GPGQAMQFGK SKAKFMMEAE TGVMFDDVAG VTEAKQELEE VVTFLKQPER FTSVGAQIPR GLLLVGPPGT GKTLLAKAIA GEAGVPFFAL SGSEFVEMFV GVGASRVRDL FKKAKENSPC LIFIDEIDAV GRQRGAGVGG GNDEREQTLN QLLTEMDGFE GNNGIIIIAA TNRPDVLDSA LLRPGRFDRQ VTVDAPDIKG RLAILAVHSK NKKLDGELSL ESIARRTPGF TGADLANLMN EAAILTARRR KESIGLSEID DAVDRIIAGM EGRPLTDGRS KRLIAYHEVG HALIGTLVKA HDPVQKVTLV PRGQAQGLTW FSPDEEQTLV TRAQLKARIM GALGGRAAED VVFGSQEITT GAGSDIQQVA SMARNMVTRL GMSDLGPVAL EGGGQEVFLG RDLMSRSEIS ESISQQVDTQ VRSMVKRCYE ETVALVAANR EAMDQLVEIL IEKETMDGDE FKSIVAEFTS VPEKDRTVPI LN
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