Gene Syncc9902_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1010 
Symbol 
ID3742718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp984819 
End bp985751 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content54% 
IMG OID637771184 
ProductABC transporter substrate-binding protein 
Protein accessionYP_377018 
Protein GI78184583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.172647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTC GTCTGATCTC AAGGGCTGCA GCTGTTGTGC TGGGTGTGGG TGTCATCGTT 
GCGGGTTGTG CTGATCGTTC CCGTGTATCT CGGGAAGATT CACGGCCACG GGTTCTCACC
ACATTCACCG TGCTCGCTGA TTTGGCGCGC AATGTGGCTG GCGATCGCCT TCAGGTGCAT
TCGATTGTTA AGGAGGGAGC GGAAATTCAT GGATATCAGC CCACGCCCAG TGATATCGAG
CGGTCTGTTG GTGCAGATCT TTTAGTTGAG AATGGGTTGG GCCTCGAACT TTGGGCACGT
CGTTTTACGG CTGCAGCAGG AGACATCCCC ACCGTCACCT TGTCGGAAGG GATGGAGCCT
CTTCTGATCC GCGAAGACGC TTATGCCGGA AAGCCCAACC CCCATGCCTG GATGTCGCCG
AAGCGGGCTA TGGACTATGT CGATCGTCTT CGGGAGGCCT TCACCAATTT GGACCCGGAT
GGTGCGGAGG ACTACGCCAA TAACGCTGAC GCCTACAACA AAAAACTTCA AGCCTTAGAT
GGTGAATTGC GTGAAGTTCT TGCCACCATC CCACCACAAC ATCGAGTGTT GGTGAGCTGT
GAAGGTGCTT TCACTTATCT CGCGACGGAT TACGGACTCG AGGAAGCATT CCTATGGCCT
GTTAATGCCG AAAGTGAGAT CACTCCGAAA CGAATGGCTC GATTGATCAA TACCGTGCGT
GAGCGTGCAG TCCCTGCGGT GTTCTGCGAA AGCACCGTTA GTGATAAGGC TCAACGAGAA
GTCGCGGCCG CAGCTAATTC TCGGTTTGGG GGGACGTTTT TTGTGGATTC ACTTTCGAAG
CCTGATGGCC CGGCGCCCAC CCTCTTGGAA TTGCAGCGTC ACAATGTGAA ACTGATCCTT
GATGGTTTAA CAGACAGGGG GGAAGACGGT TGA
 
Protein sequence
MAIRLISRAA AVVLGVGVIV AGCADRSRVS REDSRPRVLT TFTVLADLAR NVAGDRLQVH 
SIVKEGAEIH GYQPTPSDIE RSVGADLLVE NGLGLELWAR RFTAAAGDIP TVTLSEGMEP
LLIREDAYAG KPNPHAWMSP KRAMDYVDRL REAFTNLDPD GAEDYANNAD AYNKKLQALD
GELREVLATI PPQHRVLVSC EGAFTYLATD YGLEEAFLWP VNAESEITPK RMARLINTVR
ERAVPAVFCE STVSDKAQRE VAAAANSRFG GTFFVDSLSK PDGPAPTLLE LQRHNVKLIL
DGLTDRGEDG