Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0982 |
Symbol | |
ID | 3743334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 962919 |
End bp | 963446 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637771156 |
Product | putative superoxide dismutase |
Protein accession | YP_376992 |
Protein GI | 78184557 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000174344 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCAT TCCTCACCAT TTTATGTTTG ATCTGTTGGC TCATCGCTGC ACCGATGGCC AACGCGGAAC CAATTCAAAT CACGATGCGG AGCATCAGTG CCGAGGGCGT TGGGGACGTG ATCGGATCAG TCACGGCGAA AGATAGCGAC CAAGGACTTG TTATTTTTCC TGACTTAGTC AACCTGACCA CTGGAGACCA TGGCTTTCAT CTTCACAGCA ATCCAAGTTG TGAAGCAGCT CTCAACTCAG AGGGAGAATC AGTGGCCGGG CTAGCAGCAG GGGGTCATTG GGATCCAGAC AACAGCGGAA CGCACCTTGG TCCCTTTGCA AGCGGACATC GAGGCGATCT CAGCAAATTA ATCGTTGATG CCGATGCATC AACGAAAACA AGCGTCGTTG CACCTCGCCT GATAACCAAC GATCTCAAGG GCCACGCCTT AATCGTTCAT GCAGGGGGTG ACACCTACAG CGATACACCA GCATTAGGAG GCGGAGGAGC GCGTGTGGCC TGCGGTGTCG TCAATTAA
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Protein sequence | MQPFLTILCL ICWLIAAPMA NAEPIQITMR SISAEGVGDV IGSVTAKDSD QGLVIFPDLV NLTTGDHGFH LHSNPSCEAA LNSEGESVAG LAAGGHWDPD NSGTHLGPFA SGHRGDLSKL IVDADASTKT SVVAPRLITN DLKGHALIVH AGGDTYSDTP ALGGGGARVA CGVVN
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