Gene Syncc9902_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0976 
Symbol 
ID3743328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp957929 
End bp958699 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content53% 
IMG OID637771150 
Productheat shock protein DnaJ-like 
Protein accessionYP_376986 
Protein GI78184551 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.156674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTTG ATCCCCGGCA ATGGTCGTCC GCTCCCCATC CCAGCCAACG CCAACGCGTC 
ACCAGCAATG TTGAGTCTTT GCTGGTTGAA AACGATGCTC TCCGTCAAGA AGTGCGTCGG
CTTCGGGCAG AGCTTGATCG CCTCCGTACA CGTCAAGATC GACAACATCG CTATCAGTCA
TCACAAACGG TTGATGACAC GACCGAAGTT TCAAGACTTA CGGCCTCTCA AATTGCTGAT
TGGGGCCAAG TTCTGACTCA ACAGGTTGGG TGGGGGGATC TTCGTCTTCG TTGCTTAACC
GCCTTGATCG AGCGATTGAA CCGCAGTAGT TTTCATCCCC AACTGAATCT CTATCAGCGT
TTAGATCGTC TAATGCCAGG TTTTGGCACC GAGCTACTAG CCGCCACAAC CGGTTCATTG
TCCAAGAAAC GTGCAGCGGT TTTGGCTGCT TTTGCTTTCT ATGGTGTCCG TGCGAGTGAA
TGGCTGGATG AAGACCCACA ACGCGTTGTC CACGAACTTT TAAGCCGTCA GGAGACCACG
CGAGCGAGTC GAAGGACGAG GAGTGATCGA CGTTCCTCCG ATCGCAAGCG ACCAGGATCA
TTGGATGCGC GATCGATTGC CTATGAAACT TTGGGGCTTG AGCCCGGTGC CTCGCTGCAT
GAGATCAAGC AGGCCCACCG TCGTCTTGTA AAGCAGCATC ACCCGGATTT AGGGGGCTCC
GCAGAATCCT TTTGTCAGAT CAATGAGGCT TACCAGCTGT TAATGCGCTA G
 
Protein sequence
MGFDPRQWSS APHPSQRQRV TSNVESLLVE NDALRQEVRR LRAELDRLRT RQDRQHRYQS 
SQTVDDTTEV SRLTASQIAD WGQVLTQQVG WGDLRLRCLT ALIERLNRSS FHPQLNLYQR
LDRLMPGFGT ELLAATTGSL SKKRAAVLAA FAFYGVRASE WLDEDPQRVV HELLSRQETT
RASRRTRSDR RSSDRKRPGS LDARSIAYET LGLEPGASLH EIKQAHRRLV KQHHPDLGGS
AESFCQINEA YQLLMR