| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0972 |
|---|
| Symbol | |
|---|
| ID | 3743324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 954015 |
|---|
| End bp | 954788 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637771146 |
|---|
| Product | beta-carotene ketolase |
|---|
| Protein accession | YP_376982 |
|---|
| Protein GI | 78184547 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0162897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTGGCAA CTAAAGCCGC GCAAGCTAGA CACCAACGTC AAAGTCTCAT ATTGGCGGCA
TTGATTGGTT CAGCATGGAT CATCACATTC GTGATATCCA TGCTGATTAA TGTGAATGTA
TGGTCTAGCT CCGCGATTCT TGGTTTTATT CTTCTGAGAT CATTCCTACA CACTGGATTG
TTCATCGTTG CTCACGATGC CATGCATCAC AGCTTGGCTC CACTCAACGA GAACCTGAAT
AACAATATTG GAAGACTATG CCTATTTTTG TATGCGGGAC TTTCCTACAA GTCTTGTTCC
AAAAACCATA GTCTCCATCA TCGTTATCCT GAGTCTGCAG CTGATCCAGA CTTCCATTCA
ATTCAAAATT CAAAGCCAAT CAATTGGTAC TTTAGATTTC TAAGTAACTA TCTTGATGCC
AAACAGTTTT GCATTTTGAC TATTGTTTGG TTGCTACTGC TTCAAATCAC AAGCAGTGTA
AATCCTAATG CTGCTGAGAA TATTATCATT TTTTGCCCAA TACCATTAAT CATCAGTTCA
ATTCAACTTT TTTTTGTTGG CACATGCCTC CCTCACCAAA TAACGCGAAA GGAAGCAGGA
CGTCAAAGAC CTAGAAGTCT TTCATTACAT CCGCTCCTTT CGTTCGCAGC TTGCTATCAC
TTTGGCTACC ATTTGGAACA TCATTTGAAT CCAAGCACAC CCTGGTTCAA GCTGCCTAAT
CTGCGCGTCG CTTCACTACA ACGTGAACAA GCCAAGATTA AACATTCCCA CTAA
|
|---|
| Protein sequence | MVATKAAQAR HQRQSLILAA LIGSAWIITF VISMLINVNV WSSSAILGFI LLRSFLHTGL
FIVAHDAMHH SLAPLNENLN NNIGRLCLFL YAGLSYKSCS KNHSLHHRYP ESAADPDFHS
IQNSKPINWY FRFLSNYLDA KQFCILTIVW LLLLQITSSV NPNAAENIII FCPIPLIISS
IQLFFVGTCL PHQITRKEAG RQRPRSLSLH PLLSFAACYH FGYHLEHHLN PSTPWFKLPN
LRVASLQREQ AKIKHSH
|
|---|
| |