Gene Syncc9902_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0966 
Symbol 
ID3743357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp949149 
End bp950522 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content40% 
IMG OID637771140 
Producthypothetical protein 
Protein accessionYP_376976 
Protein GI78184541 
COG category[S] Function unknown 
COG ID[COG4487] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.173877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA TTATCTGTCC ACACTGCAAT ACCGCATTCA AAGTGGATGG AACAGGATAC 
GCGGATATTT TGAAGCAAGT CAGGGATCGT GATTTTGAAC AGCAGTTGAA GCAACGTTTA
GATCTAGCTG AAAAGGACAA GCAAAATGCC ATTGAGCTTG CCATGGCTAA AAAAGCCTCC
GAGCTCCAAA GGCTGGAGAG TGAATTAAGA GATCGAGATT TAAAACAGCA GCTTGCCATA
AAAGATGCTG TTCTGTCGGC AGAAAAGCAA CGTGATTTAA TTGCCAAAGA ACTTCAACAA
ATTCAAGAGA ATCAACAGCA AGAGCGTCGA TTTACAGAAT CAAAATTTGC CCAAGAATTT
CAAACTCTTA CATTGCAAAA GCAAGCAGAA TTGCGCGATC TACAGTCCAA ATTAGACGCG
AGCAGTATTC AAAAAAAGCT CGCGATCAAT GAAGCAGTTA ATACCATTGA AAAGGAGAGG
GATGCACTCA GGAATCAGCT CAGTGAATCT GAACTGAAGC ATCAATTAGA ATCAAAATCA
CTCAAAGATC GGTACGAAGC CCAAATTTAT GATCGAGATG AGGCAATTGT CCGACTTCGT
GACATGAAAG CAAGGCTCTC CACGAAAATG GTTGGAGAGA CATTAGAGCA ACATTGCGAG
ACCGAATTCA ATCGTCTTCG AGCGGCGGCA TTTCCAAGGG CATATTTCGA AAAAGACAAC
GATGCAAGTT CTGGCAGCAA AGGTGATTAT ATTTTCCGCG ACTTTGATGA ATCCGGTAAC
GAAATTATTT CAATCATGTT TGAAATGAAA AACGAAACTG ATACAACAAT AACTAAGAAG
AAAAATGAGG ACTTTTTTAA GGAACTCAAC AAAGATCGGG TCGAGAAAGA CTGCGAATAC
TCAGTGCTAG TGTCACTTTT AGAACCAGAG AGTGAACTTT ACAACTCTGG GATCGTAGAT
GTATCTCATC GTTTCGCAAA AAGCTACGTT ATCAGGCCTC AATTTTTTAT CCCGTTTATC
ACTCTCCTCC GAAACGCTGC TCTTAAGTCG ATTGAGTACA AGGCCGAACT CGCCTTAATC
AAAGCACAAA ATATTGATGT GACTCATTTT GAGGAGGATC TTGAATCGTT CAAAAGTGCT
TTTGGTAGAA ACTATGATTT AGCTTCACGG CGTTTCCAAA CGGCAATTGA TGAAATCGAC
AAGTCAATTG ATCACCTACA AAAAACGAAA GATGCTCTTA TGGGAGCCGA CCGTAATTTG
CGCCTTGCAA ACGACAAAGC ACAAGATGTA ACCGTAAAAA AACTCACAAG AAACAATCCA
ACGATGAGCG ACAAATTTAT GGAGCTAAAA AATAAAAGTG ACGCTGATCA ATAA
 
Protein sequence
MNDIICPHCN TAFKVDGTGY ADILKQVRDR DFEQQLKQRL DLAEKDKQNA IELAMAKKAS 
ELQRLESELR DRDLKQQLAI KDAVLSAEKQ RDLIAKELQQ IQENQQQERR FTESKFAQEF
QTLTLQKQAE LRDLQSKLDA SSIQKKLAIN EAVNTIEKER DALRNQLSES ELKHQLESKS
LKDRYEAQIY DRDEAIVRLR DMKARLSTKM VGETLEQHCE TEFNRLRAAA FPRAYFEKDN
DASSGSKGDY IFRDFDESGN EIISIMFEMK NETDTTITKK KNEDFFKELN KDRVEKDCEY
SVLVSLLEPE SELYNSGIVD VSHRFAKSYV IRPQFFIPFI TLLRNAALKS IEYKAELALI
KAQNIDVTHF EEDLESFKSA FGRNYDLASR RFQTAIDEID KSIDHLQKTK DALMGADRNL
RLANDKAQDV TVKKLTRNNP TMSDKFMELK NKSDADQ