Gene Syncc9902_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0890 
Symbol 
ID3742343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp886617 
End bp887702 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content56% 
IMG OID637771064 
ProductK+-dependent Na+/Ca+ exchanger related-protein 
Protein accessionYP_376900 
Protein GI78184465 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAT TTCTCCAGGC CACGATCGAA GTTCTCCTTG GCATCGCTCT GCTGTTTGGC 
GGTGGTGAAC TTTTTGTTCA GGGGTCTATC GCCCTGGCTG TGATTTTCGG GATTCCTCAG 
CTGGTGATTG GACTCACCGT GGTGTCGCTG GGAACCAGTG CACCAGAGCT GTTTGTCAGC 
CTTAATTCCG TATTTCAGGG GTCCGATGCA CTTGCCCTAA GCAACGTGGT GGGCAGCAAC 
ATCTTCAATG TGATGGTGGT GCTGGGGAGC AGTGCGTTGG TGCTGCCCCT GCGCGTTGAA 
AGTCGGCTGG TCCGCCGAGA TGTGCCTTTG ATGATTGCCG TTTCGGCCGC CGTATGGGGG 
ATGGCGTCCG CAGGACGCGT GACCTGGCAA GCAGGCCTTG CCCTTCTCCT GGGCCTGATC 
ATCAACACCA TCTGGGAGAT CCGAACCGCA CGGGAACAGC CGGATGACAG CGAAAGTGCA 
GAACCAGAAA TCGAAGAAAA CGCCGCAGAA GGTGGATGGC ACCTGGCTGT TCTACGGCTG 
ATTGGTGGCA TCGCAGTGCT CACGGTTGGA TCCAAAGTTT TGGTGAGTGG CGCCACCAGC 
GCTGCAACGC TCCTCGGCGT CAGTGAAGCC GTCATCGGAT TGACGATCGT GTCGGCTGGT 
ACCTCCATGC CGGAACTGAT TACGTCGCTC GTTGCAGCCC TCCGCGGTCG AACCGATTTG 
GCCATCGGCA ACGTTGTTGG CAGCTGTCTT CTCAACCTGA TGCTTGTCCT AGGAGGCACC 
GCATTGGTCA CAGGAAGTCA GGGACTGAAC GTCTCCCCCG ACCTGATTCA TGACGACCTA 
CCAGTGATGC TTCTCACCAG CCTTGCTTGC CTCCCGATCT TCTGGACTCG AGGGCGGATC 
AGTCGATTGG AAGGTGGTTT GTTGCTGAGT CTTTATGTCC TCTACATCGT TGACAACGTT 
CTTCCCCGGA CAAACCTCTC AAGTTGGTCT GATGAATTCA GATTGGTGAT GCTTTGTTTG 
GTTCTACCGG TCGTGATGAT CACGATCATC ACGCAAGCCG TCGTGTATTG GCGGACGAGC 
CGTTGA
 
Protein sequence
MPEFLQATIE VLLGIALLFG GGELFVQGSI ALAVIFGIPQ LVIGLTVVSL GTSAPELFVS 
LNSVFQGSDA LALSNVVGSN IFNVMVVLGS SALVLPLRVE SRLVRRDVPL MIAVSAAVWG 
MASAGRVTWQ AGLALLLGLI INTIWEIRTA REQPDDSESA EPEIEENAAE GGWHLAVLRL 
IGGIAVLTVG SKVLVSGATS AATLLGVSEA VIGLTIVSAG TSMPELITSL VAALRGRTDL 
AIGNVVGSCL LNLMLVLGGT ALVTGSQGLN VSPDLIHDDL PVMLLTSLAC LPIFWTRGRI 
SRLEGGLLLS LYVLYIVDNV LPRTNLSSWS DEFRLVMLCL VLPVVMITII TQAVVYWRTS 
R