Gene Syncc9902_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0888 
Symbol 
ID3742341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp883767 
End bp885014 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content55% 
IMG OID637771062 
Producthypothetical protein 
Protein accessionYP_376898 
Protein GI78184463 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTTT CATCAGCCAC AGCTACATCA GTCCCTACAA CCCCCCTGAG CTGGGACGAG 
CTGACGTTGC ACGCAATGGC CGAACAGGAA CGTGTGCAAG GACCCACCAA CGCCCAAGCC
GACCTTCGTT TATTCGGCAA TGACCCAAAC AGTGTGCAAG TCACGCTGTT CAGGGATCAT
CACGCCTGGT GTCCCTACTG CCAAAAGATT TGGCTTTGGT TGGAGTTCAA GCGAATTCCC
TACAAAATCC AAAAGGTGAC CATGCGTTGC TATGGACCGA AGGAGCCTTG GTTTCTAAAA
AAAATTCCCT CAGGAATGCT CCCTGCCTTG GAGCTCAACG GAGAATTGAT CACAGAAAGT
GATGTGATCT TGCTTGCTCT TGAGCAACAG TTTGGGCCCC TGGGCGGTGC GATGACCGAC
TCAGATTCTT TGGAACTTAG ACATTTAGAG CGGCTCTTGT TTCGTGCTTG GTGCATCTGG
CTCTGTAGTC CAGGGCTCAC GTCTCGCCAG CAACACCAAG CCCAAGAGCA ATTCAGAGCG
GTGGCCCAGC GCTTTGAACA AGAGCTCAAT ACGACACCTG GCCCCTGGCT GCGCAGCGAT
CAACCCGAAA CCGTTGATTT GTTATTTGTC CCGTACGTGG AACGAATGAA CGCCTCGTTG
GCGTACTACA AGGGCTATCG ATTGCGGCGG GAACACCCCA ACATCGATCG CTGGTTTCGT
GCTCTTGAAT CCCTGGAGAC CTACCGCGGA ACCCAGAGCG ATATGCACAC CCATGTCCAT
GATCTACCAC CCCAAATGGG AGGTTGTTGG TCGGACAATT CGGAACTTTC CACCGAGCTT
GCAGCCAAGA TCGACCGTGG CGATGGACTC GGTGACGACG AAGCGATTTG GCCCGACGAC
ACACTCCATG GTCAAGCGGC CCTTGCCTTA TCTCGAGTGA TACGCCATCG CGACCAGCTG
CTAAAACGCA ATCCATCCGG CAGCCAAAGA TTCGACCTGC CATTGCGTTG CGCACTCACC
CGACTCATTA CCGGAGCAGC GTGCCAACCA CCGAAAGGTT CTGCCGCATC ACTGCGCTAT
CTACGCGACC GCATCTCAAT TCCACGTGAT ATGCCCTTAC CCGCAGGGCG TCTTCTCCGC
CAAGCCCTAG AAGCAACAGC AGCCATGGAT GGCCCACAAC AGGGGGAACC GCTGGGGCTG
CGAAATCGTT TTGATCAAGA CCCCAGGGCT TTTTTGATTC GGCCATAG
 
Protein sequence
MSVSSATATS VPTTPLSWDE LTLHAMAEQE RVQGPTNAQA DLRLFGNDPN SVQVTLFRDH 
HAWCPYCQKI WLWLEFKRIP YKIQKVTMRC YGPKEPWFLK KIPSGMLPAL ELNGELITES
DVILLALEQQ FGPLGGAMTD SDSLELRHLE RLLFRAWCIW LCSPGLTSRQ QHQAQEQFRA
VAQRFEQELN TTPGPWLRSD QPETVDLLFV PYVERMNASL AYYKGYRLRR EHPNIDRWFR
ALESLETYRG TQSDMHTHVH DLPPQMGGCW SDNSELSTEL AAKIDRGDGL GDDEAIWPDD
TLHGQAALAL SRVIRHRDQL LKRNPSGSQR FDLPLRCALT RLITGAACQP PKGSAASLRY
LRDRISIPRD MPLPAGRLLR QALEATAAMD GPQQGEPLGL RNRFDQDPRA FLIRP