| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0885 |
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| Symbol | |
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| ID | 3742338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 880470 |
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| End bp | 881597 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637771059 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_376895 |
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| Protein GI | 78184460 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTT TCATTCGTTG GATCGGACTG GCCCTGATCG GGACAAGCCT GTCCTCATGC
GGTTTGATCA AGTCCCAACT GGGGTTGGGT CCCAAACCCC CTCAATTGGC TCCACCCGTT
GTCAATGACC AACCTCGCAG TGCCCCACTC CAGGCTCGCG AGAATGTGAT TGTGAAAGCG
GTGGACAGGG TGGGGCCCGC CGTGGTGCGA ATTGATGTGG TCAAAAAAGT CAATAATCCT
TTGGGCGGGA TTTTTGGAAT CGGCCCTTCG ACCCAGCGAC AGCAAGGACA GGGCTCAGGC
TTCATCACGC GAAGCAATGG GTTGATTTTC ACCAATGAAC ATGTCGTTCG AGGGGCCGAC
CAAGTGGCCG TCACCCTTCC CGATGGGCGA AGCTTCAAAG GCAAGGTGCT TGGGGGCGAT
CCCCTCACCG ACGTTGCAGT GGTGAAGGTC GTCGCCGAAA ACCTGCCAGT GGCATCCCTC
GGCAACTCCG ATGACTTGAA GCCCGGTGAA TGGGCCATCG CCATCGGTAA TCCTTTTGGC
CTGAACAACA CCGTCACGGC CGGGATTATC AGCGCCGTCG ACCGAACCAA CGCCGTGGGA
GAAGGCCAAC GCGTTCCATA TATCCAAACG GATGCAGCCG TGAATCCTGG CAACAGCGGT
GGGCCGCTTA TCAATGCTGC TGGCCAGGTA ATCGGCATCA ACACGGCGAT CAGAACAGCC
CCAGGGGGAG GACTCAGCTT TGCCGTTCCC GTCAATCTGG CGAAGCGAAT CGCCCAGCAG
ATTGTGAGCA CGGGGGAGGC ATCACATCCC TTTATTGGAG TTCAGCTGCG GAGCCTGACC
CCCCAACTCG CCCGAGAGAT CAATGCCACC GGCAGCAGCT GCAACGTGCC AGAACTCAAC
GGGGTTCTGG TCGTGGAGGT TGTACCCAAT ACACCTGCTG CGGAGGCAGA CATTCGCCAA
TGCGATCTGA TTCTTTATGT GGACGGCGAA TCAGTACAAA ACCCCACGGA AGTTCAGCTT
GCCGTTGACC GCGGCGAGGT GGGGCAACCC ATGCAGCTCA AACTGAGACG CGATGGCGAT
GAAATCTCAG TTGAAGTGCT GCCCAAAGAA TTACCCCGTC AAAATTGA
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| Protein sequence | MPTFIRWIGL ALIGTSLSSC GLIKSQLGLG PKPPQLAPPV VNDQPRSAPL QARENVIVKA
VDRVGPAVVR IDVVKKVNNP LGGIFGIGPS TQRQQGQGSG FITRSNGLIF TNEHVVRGAD
QVAVTLPDGR SFKGKVLGGD PLTDVAVVKV VAENLPVASL GNSDDLKPGE WAIAIGNPFG
LNNTVTAGII SAVDRTNAVG EGQRVPYIQT DAAVNPGNSG GPLINAAGQV IGINTAIRTA
PGGGLSFAVP VNLAKRIAQQ IVSTGEASHP FIGVQLRSLT PQLAREINAT GSSCNVPELN
GVLVVEVVPN TPAAEADIRQ CDLILYVDGE SVQNPTEVQL AVDRGEVGQP MQLKLRRDGD
EISVEVLPKE LPRQN
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