Gene Syncc9902_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0884 
Symbol 
ID3742337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp879827 
End bp880468 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID637771058 
Producthypothetical protein 
Protein accessionYP_376894 
Protein GI78184459 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.585528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGGA TCGTGGTGAT GGCTCGCTGG CCGGCAGCCA ACCGGTGCAA GCAACGCCTC 
AACCACGACC TGAGCGGTTG CGCTGGGGTG CTCAATGCGG GGGAAAGCGC CATGCGTATC 
CAACGTCAAC TCACGCGTCA CACGGCCTCC GTGGTGACGT CGATGGCAGC GTCCCGAACC 
ATCACAGCCA CGTTGGCCAT CGACGGCCTT GGCCCCAGCG CCGCCCGGCG CTGGGGAGAG 
CAACTCGGCC TAACCCACGT GGAATTACAA GGGGGCGGAA ACTTGGGCTG CAGGATGAAA 
CGCCAACTCC TTTTGGGCCA ACGCACGGAC CGCAGCACCC TGTTCATCGG CACGGATCTT 
CCGGACCTAA ACAGCAACGA CCTGCAAGCG GCAATCACCA GCCTTCAAGG CAACGATCTT 
GTGCTCGGTC CCGCAGAGGA TGGCGGCTAC TGGCTGATTG GTTTCGGTCG GAAACTTCTT 
GCACGCCCAC AACACTGGCC TCTAGGGGGA ATTCCCTGGG GGAAGGCGAA TGTGCTCGAA 
CAAACAAAAG CTCAAGCGGC ACAAAACCAA CTCACCACTG CCCTGATCGC TCGGCGGAAT 
GATCTCGATC ACCTGGCAGA TCTCAGGCCT TGGCAGGGTT AA
 
Protein sequence
MPRIVVMARW PAANRCKQRL NHDLSGCAGV LNAGESAMRI QRQLTRHTAS VVTSMAASRT 
ITATLAIDGL GPSAARRWGE QLGLTHVELQ GGGNLGCRMK RQLLLGQRTD RSTLFIGTDL 
PDLNSNDLQA AITSLQGNDL VLGPAEDGGY WLIGFGRKLL ARPQHWPLGG IPWGKANVLE 
QTKAQAAQNQ LTTALIARRN DLDHLADLRP WQG