Gene Syncc9902_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0883 
Symbol 
ID3742336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp879153 
End bp879839 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID637771057 
Producthypothetical protein 
Protein accessionYP_376893 
Protein GI78184458 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAGGGT TAACCGTGGT GGTTCCCGCC CTCAATGAAG CGCGGCACCT CCCCTTCCTC 
CTGGCAGATC TCCAGCGGTG GCCCGATGCC CTCCAAATCA TTGTTGTGGA TGGAGGCAGT
ACGGACAAAA CCATTCAGGT GGCCCACCAA GGAGGCGCCC AGGTTGTGCA AAGCCCTGTG
CAGGGTCGAG GACAACAACT CCAACGGGGT CTGCAGTTGT CTCAGCACAG CTGGTTGATG
GTGTTGCACG CCGATAGTCG GCTGAGCCAG CACTGGGTGG ATCACGTCCA AAGGGTGCTC
AGCATGGCGC GGGGACATCA ACAGGCTTGG GCCTTTGACT TCCGCGTCGA TCAACGCCGG
CCATTGTTGA AGCTGCTGGA ATGGTGTGTG GCGATTCGCA GCCACTGGGG CCAGATGCCC
TATGGAGACC AAGGTCTCTT AATCCACCGC AGCCTGTACG AACGCGTTGG GGGCTATCGA
TCCTTAGCTC TCATGGAAGA TGTCGACCTC ATCCAAAGGC TGCAACAGAT CAGTCGAATT
GGTGCCCTGG GGTGCGCCCT CACCACAAGC GCACGACGCT GGACCCGTCG CGGCGTTTTG
AACCAAGCCT GGAGCAATGC TCAGCTAAGA CGACGCTGGA AAAACGGCGA GGACGCCGAA
CAATTAATTC AAATTTATCG ACGTTGA
 
Protein sequence
MAGLTVVVPA LNEARHLPFL LADLQRWPDA LQIIVVDGGS TDKTIQVAHQ GGAQVVQSPV 
QGRGQQLQRG LQLSQHSWLM VLHADSRLSQ HWVDHVQRVL SMARGHQQAW AFDFRVDQRR
PLLKLLEWCV AIRSHWGQMP YGDQGLLIHR SLYERVGGYR SLALMEDVDL IQRLQQISRI
GALGCALTTS ARRWTRRGVL NQAWSNAQLR RRWKNGEDAE QLIQIYRR