Gene Syncc9902_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0853 
Symbol 
ID3741955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp854748 
End bp855383 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content57% 
IMG OID637771026 
Productalkylated DNA repair protein 
Protein accessionYP_376863 
Protein GI78184428 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.487927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGGGA AGGTTCCCGT CAAAAAATGG GCTTGTCATC CGACGTCACG AATGGACCCA 
ATCATCAGCA CCGATGAACC AACCGATTGG TCGCTCCTCC CCGGCTGGCT GTCTACAGAC 
GATGCCCAAC GATGGCAGCT GCTGCTGGAG CACAACATCT CCTGGGAGCA GCCGCTCGTG 
CAGGTGTTTG GCAAGTACCA CCGCGTGCCG CGTAAGACCG TTTTTTTAGC CGAGCAGGGA 
CTGCAGTACC GCTACAGCGG TGCCATCCAT GTCGGGGAGG GATGGCCGGA ATGGTTCCAT 
CCGTTAGTCG AGCAGGTGAA CCACATTGCT CAAGCTCAGT TCAACGGCTG CCTTCTCAAT 
CTTTACCGCG ATGGCGACGA CCGCATGGGC TGGCATGCCG ACGACGAGCC GGAAATCGAC 
CAGACACAAC CAATTGCGTC CCTCTCGCTG GGATCAACGC GAGACTTTCT GTTCAGACAT 
CGCGGTGATC AACCCAAGCG AGCAGCGATC CCACTGGCTG ACGGCGATTT GCTGATCATG 
CATCCCGGCT GCCAAGGGCA TTGGATGCAC AGCGTGCCCC AACGCCGCAA AGTGAAAACG 
ATGCGAATCA ACCTCACCTT TCGCCATTTC CTATAG
 
Protein sequence
MYGKVPVKKW ACHPTSRMDP IISTDEPTDW SLLPGWLSTD DAQRWQLLLE HNISWEQPLV 
QVFGKYHRVP RKTVFLAEQG LQYRYSGAIH VGEGWPEWFH PLVEQVNHIA QAQFNGCLLN 
LYRDGDDRMG WHADDEPEID QTQPIASLSL GSTRDFLFRH RGDQPKRAAI PLADGDLLIM 
HPGCQGHWMH SVPQRRKVKT MRINLTFRHF L