Gene Syncc9902_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0843 
Symbol 
ID3741885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp845364 
End bp846470 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content58% 
IMG OID637771016 
Producthypothetical protein 
Protein accessionYP_376853 
Protein GI78184418 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCGACT TCCAAGCAGA ACCATCCGTT GAACGCCTTG GGGTTCTGAT CTGTGGCCAC 
GGCAGCCGCA ACAGGCTTGC CGTTGAAGAA TTTGCGCAAA TGGTCGAAAA ACTTCGACCC
AAGCTTGCTC CCATGCCTGT AGAGCACGGC TACTTGGAGT TTGCCCAACC GATTCTGAGG
GAAGGATTGG AATCACTCCG CCAACAGGGC GTCACCAAAG TGTTGGCCAT CCCCGCCATG
TTGTTTGCAG CAGGACATGC CAAGAACGAC ATTCCCTCCG TTCTGAATAC CTACACGGCG
GAAACGGGCC TGCCCATCGA CTACGGCCGC GAGTTGGGCG TCGATCGATT GATGGTGGCT
GCAGCAGGGT CCAGGGTCCA AGAAGCTTTG GAGCGCGCAT CCAACGACAT CTCCGTCTCC
GAAACATTGC TGGTCGTCGT CGGGCGCGGA TCCTCCGATC CCGACGCCAA CTCAAACGTG
GCGAAAGTGA CGCGGATGTT GGTGGAGGGT TTTGGCTTTG GCTGGGGTGA AACCGTCTAT
TCCGGCGTGA CGTTCCCCCT CGTGGATCCC GGCCTTCGAC ACGTGGTGCG ACTGGGGTTC
CGCCGCATCG TTGTGGTTCC TTATTTTTTA TTTTCTGGGG TGCTCGTGAG TCGAATCCGT
CAGCACACCG ACCTAGTGGC GGCCGACTAT CCCGATGTGG AGTTCCTCTC CGCCGGCTAC
CTAGGCCAAC ACCCGATGGT GGTGGACACA TTCAGAGAGC GGGTGGAGGA GGTGCTCCGT
GGAGATACCG CAATGAATTG CTCCCTCTGC AAGTACAGAG CTCAGGTGCT GGGCTTTGAA
CAGGATGTAG GACGGGCCCA AGAAAGTCAC CACCATCACG TCGAGGGATT GGCTGAGAGC
TGCACGCTCT GCGAGCTCGA ATGCACAGGC GCCTGCCAAC CGGATGGAGT CCCGCCTGGG
GCTCATAGCC ATGGACACAG CCATCAACAT GGCGAGCCGG ATCACGAGCA TCACCACCCC
CCCTATCCCC ACGCTGAACA TCCGCTGGGT CCAGTCACGC TGAGCCAAAC CTTGAAAGCA
TCCAAGGATT CCCTTCAGAA GTCTTAA
 
Protein sequence
MADFQAEPSV ERLGVLICGH GSRNRLAVEE FAQMVEKLRP KLAPMPVEHG YLEFAQPILR 
EGLESLRQQG VTKVLAIPAM LFAAGHAKND IPSVLNTYTA ETGLPIDYGR ELGVDRLMVA
AAGSRVQEAL ERASNDISVS ETLLVVVGRG SSDPDANSNV AKVTRMLVEG FGFGWGETVY
SGVTFPLVDP GLRHVVRLGF RRIVVVPYFL FSGVLVSRIR QHTDLVAADY PDVEFLSAGY
LGQHPMVVDT FRERVEEVLR GDTAMNCSLC KYRAQVLGFE QDVGRAQESH HHHVEGLAES
CTLCELECTG ACQPDGVPPG AHSHGHSHQH GEPDHEHHHP PYPHAEHPLG PVTLSQTLKA
SKDSLQKS