| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0841 |
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| Symbol | |
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| ID | 3741883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 843035 |
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| End bp | 844690 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637771014 |
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| Product | oxidoreductase |
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| Protein accession | YP_376851 |
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| Protein GI | 78184416 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.793794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCT CCAGCCAGAT GGTCGAAGGT GTTTGGGACG CCATCGTTGT TGGCTCTGGA
GCGAGTGGCG GCGTCGCCGC CATGACCTTG GCGGAAGGGG GGGCCAGGGT GTTGGTCATT
GATGCGGGGC CGAACCTCAG CAGCAGCGAA GCACTGACCT CAGAGCCCGG CAATTTGATG
CGTCGTTTGG CTGGTCTGAT GAGTGGACAG CATCGACGTC AGGCCCAACA CCCTGGGTAC
TGGAAAGCCA ACCCCCGGTT ATATGCCGAT GAGCGGTTGC ATCCCTACCA CCATCCGCCC
GATCGTCCGT TTCTCTGGAC TCGTGGTTTG CAAGTGGGCG GTCGCAGCCT CACCTGGGGC
GGCATCACCC TTCGACTGTC CGATGAGGAT TTCACGGGTG TTCAACTCGA GGGTGAAGAG
GTGTCGTGGC CGATCAGGAG CCAAGACCTA ACAGCGCATT ACTCCGCTCT AGAACAATTT
CTGAAGGTGC ATGGTGGATC CAACCACCTA ACCCATCTTC CGGACGGAGC CACCGAGCCT
GCTCTCCCCT CCACTGCCGC AGAACAACGC TTTATGGAAG CGGTAGCGGA TCAGCTCGGC
ATCGATGTGA TTCCATCGCG GGGATTTGGC CCCCACGACC CCAGCCGTGA TGGCCCTTGG
CCGCGTTCCA GCAGTTGTGG CAGCACCCTG CCCCGCGCAA TGGCCACGGG AAGGGTCCAG
CTGCTTTCCA ATCACCTCGT CGAGCGCCTT GAGCTGACGT CTTCGGGTTC AAAAGCCACC
GGAGTTGTCG CCGTTAACCA AGCCAATGGC AATCGCTATC TCATCCCTGG TGATCTGGTC
GTGCTGGCCG CGTCCACCAT TCAGTCGGTG TCGATCTTGT TGCGCTCGAG TGAGCAAGTT
CAGCGGGGCG GTGTGGTCGA TCCATCCGGG CGCCTTGGAA CACGATTGAT GGACCATGTG
TCCACGAGTC AGTTTTTTGC GTTTCCAGGA TCGAGCTCTG GGCCCCAGCC ACCCCTCACT
GGAGCCGGTA GCTTTTTTAT TCCTTTTGGA CGTCATCTCC ATCAGCCTTC CGACCAGCCG
ACATTCCAGG GCGGTTATGG ATTGTGGGGG GGGATCGGAC GTTTTGACCC GCCGGCTGTC
CTGAAGCGTC GGGCTAACAC CACGACAGGA TTTTTGATTG GTCATGGAGA AGTTCTTCCC
CGGGCTGACA ACAGGGTGAC CCTGCAGGGA CAAGTGGATC GTTGGGATGT GGCTGTTCCC
CATATCAACT GCCAATGGAG CGCCAACGAA TTGGCAATGG TGGATCACAT GCGTGGACGG
ATTCAGGCTT GCATCTCTGC TGCAGGGGGG GAATCCTTGC CAATCAAAGA CCTGTTTTAC
CTGCCTTTGG TCGAGCCCTT TTTAAAAGGC GCAGTGGCCC TAACCGAGGG GGCAGCTCCT
CCTGGCTATT ACATCCACGA AGTCGGAGGA GCGGCATTTG GTTGTGATGA ACGCAGCAGC
GTTCTCAACT CGAGCAATCA ACTGTGGAGA GCACCAAATG TGCTTGTTGT GGATGGCGCT
TGTTGGCCAA CCTCCGCTTG GCAGTCTCCA ACCCTCACGA TGATGGCGAT CAGTCGACGC
GCTTGCCTCC TTGCCCTTAG GGATCGGACT GCATAA
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| Protein sequence | MSSSSQMVEG VWDAIVVGSG ASGGVAAMTL AEGGARVLVI DAGPNLSSSE ALTSEPGNLM
RRLAGLMSGQ HRRQAQHPGY WKANPRLYAD ERLHPYHHPP DRPFLWTRGL QVGGRSLTWG
GITLRLSDED FTGVQLEGEE VSWPIRSQDL TAHYSALEQF LKVHGGSNHL THLPDGATEP
ALPSTAAEQR FMEAVADQLG IDVIPSRGFG PHDPSRDGPW PRSSSCGSTL PRAMATGRVQ
LLSNHLVERL ELTSSGSKAT GVVAVNQANG NRYLIPGDLV VLAASTIQSV SILLRSSEQV
QRGGVVDPSG RLGTRLMDHV STSQFFAFPG SSSGPQPPLT GAGSFFIPFG RHLHQPSDQP
TFQGGYGLWG GIGRFDPPAV LKRRANTTTG FLIGHGEVLP RADNRVTLQG QVDRWDVAVP
HINCQWSANE LAMVDHMRGR IQACISAAGG ESLPIKDLFY LPLVEPFLKG AVALTEGAAP
PGYYIHEVGG AAFGCDERSS VLNSSNQLWR APNVLVVDGA CWPTSAWQSP TLTMMAISRR
ACLLALRDRT A
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