Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0803 |
Symbol | |
ID | 3741904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 810354 |
End bp | 811382 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637770976 |
Product | small mechanosensitive ion channel |
Protein accession | YP_376813 |
Protein GI | 78184378 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGTGC CTGACGTCCT TCTTGATATA GCCGGAGGAA TTGCATTAAC GCTCTTAATC TCCTTTATCT TTAAAAAAAT TCTCCCCCGA TTAGCAAAAA AAACACAATC AGATTTCGAT GATTTTTTAT TACGTGAAAT TAGCGGCTTA ATCCTTCCGT TCGGAATTAT TGCGGTTCTT CTTCTGGCGG AAGCCAAGCT TCAGCTCCCA GGGGGGCTCA ACAGGCCCTA CGAAATTATT CTGACGATCG TAGGAGCCGT TGTTGTTATT CGTTTGATCA ACCGGATCGG CATGCGCCTG CTGCAAGGCA TTGCACGACG CAGCGGCAGA GACGACATTG AGCAACTCAT CAAAACTCTT TTCCCTCTCT TAAGAGCACT CACTTGGGTC GTCGTCAGCC TCATTATTCT TCAAAGTCAA GGCGTCAAAC TGGCCGTTGT ATGGGGACTA CTGAGTGCTG GCGGCATTGG ATTAGGCCTC GCACTAAAGG AACCGGCCCA AGAATTATTT GCTTACCTAA TGATTCTGAT CGACAAACCC TTTACGATCG GACAATTCAT TGCGGTCGAC TCTGTATCGG CAACTGTTGA AAAAATCGGC GTTCGATCCA CACATCTTCG AAGCTTAAGA GGTGAAATTG TTGTTATCAA TAACTCAAAG CTTACCAGTT CCAATATCGA GAATTTTGCC ACCATGCAAC AACGTCGAAT GATTTATTCA ATCGGCGTTA CCTATCAAAC TACAGCGGAT CAGATTCAAT CCATACCAAC AACAATACAA ACCATCGTTG ACAACACAAC ACATGCAATT TTCAACCGCT GTCATTTCAC AGGCTTTGGC GATTACAGCT TAAATTTTGA AATTGTTTAT TACATCGACA ACCGCGATTA CACCAATGCC TTGGACATTC AACAATCGAT AAACCTAAGC ATCATGCGCA AATTTGAAGA ACAAGGAATT GAATTTGCCT TCCCGAGTCA GACGCTCTAT CTCGAAGGCA ATGGAATAAC CGCGGGAGCA GCGTCTTGA
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Protein sequence | MHVPDVLLDI AGGIALTLLI SFIFKKILPR LAKKTQSDFD DFLLREISGL ILPFGIIAVL LLAEAKLQLP GGLNRPYEII LTIVGAVVVI RLINRIGMRL LQGIARRSGR DDIEQLIKTL FPLLRALTWV VVSLIILQSQ GVKLAVVWGL LSAGGIGLGL ALKEPAQELF AYLMILIDKP FTIGQFIAVD SVSATVEKIG VRSTHLRSLR GEIVVINNSK LTSSNIENFA TMQQRRMIYS IGVTYQTTAD QIQSIPTTIQ TIVDNTTHAI FNRCHFTGFG DYSLNFEIVY YIDNRDYTNA LDIQQSINLS IMRKFEEQGI EFAFPSQTLY LEGNGITAGA AS
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