Gene Syncc9902_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0788 
Symbol 
ID3743895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp798285 
End bp799358 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content59% 
IMG OID637770963 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_376800 
Protein GI78184365 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0487359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAT ACCGCGTCGT TCTTTTGCCA GGCGATGGCA TTGGGCCTGA AATCACCGCT 
GTGGCCCGCC AGTTACTGGA TGTTGTGGCC CAGCGTCATG GGTTTCAGCT CATGTTTGAG
GAGCAGCCGA TCGGCGGCTC TGCCATTGAT GCCACCGGTG AACCACTGCC TGCCAGCACG
CTCACGGCAT GTCGGTCGGC CGATGCGGTG CTTCTGGCCG CGATTGGGAG CCCTCGTTTC
GACAGCTTGC CCCGGGAGAA ACGACCGGAA ACGGGACTGC TTGGTCTTCG ATCAGGCCTC
GAGCTGTTCG CCAATCTGAG GCCGGTGAAG ATCGTCCCGG CTTTGATTGG TGCCAGCAGC
CTCAAGCAGG AGGTGATTGA AGGGGTCGAT CTGATGGTGG TTCGCGAGCT CACAGGTGGC
ATTTATTTCG GTCAACCGAA GGGTCGGATT GAAGCCGATG GGGATGAACG AGGGTTCAAC
ACGATGACCT ACTCCGCCTC AGAGGTGGAT CGCATTGCCA AGGTGGCTTT TGAGATCGCT
GGAGAAAGAA ACAATCGCCT TTGTTCCGTG GATAAAGCCA ATGTTCTGGA TGTGAGCCAG
CTTTGGCGGG ACCGCGTTGA TGCGATGGCG CCTCGTTATG GCGAGGTGGA TGTCAGCCAC
ATGTACGTGG ACAATGCGGC GATGCAGCTG GTGCGTGACC CCCGCCAGTT CGACGTGCTG
CTGACGGGCA ACTTGTTTGG CGACATCCTC AGCGATGAGG CTGCGATGCT TACGGGGTCG
ATTGGAATGT TGCCCTCCGC CTCCCTCGGT AGCGATGGTC CTGGCTTGTT TGAGCCCGTG
CATGGCTCTG CTCCAGACAT CGCCGGTCAA GACAAGGCCA ACCCCATGGC CATGGTGCTC
TCCGCCGCGA TGATGCTGCG CATTGGTTTG AAGCAGAGTT CTGCCGCAGA CGACCTTGAA
AGGGCCGTTG ATGCCGTTCT CGCCTCCGGA TTCCGAACCG GCGATTTGAT GTCGGAAGGC
TGTACTCCGC TGGGATGTCA GGCCATGGGC GAGCAATTGC TTAAGGCTCT TTGA
 
Protein sequence
MAQYRVVLLP GDGIGPEITA VARQLLDVVA QRHGFQLMFE EQPIGGSAID ATGEPLPAST 
LTACRSADAV LLAAIGSPRF DSLPREKRPE TGLLGLRSGL ELFANLRPVK IVPALIGASS
LKQEVIEGVD LMVVRELTGG IYFGQPKGRI EADGDERGFN TMTYSASEVD RIAKVAFEIA
GERNNRLCSV DKANVLDVSQ LWRDRVDAMA PRYGEVDVSH MYVDNAAMQL VRDPRQFDVL
LTGNLFGDIL SDEAAMLTGS IGMLPSASLG SDGPGLFEPV HGSAPDIAGQ DKANPMAMVL
SAAMMLRIGL KQSSAADDLE RAVDAVLASG FRTGDLMSEG CTPLGCQAMG EQLLKAL