Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0788 |
Symbol | |
ID | 3743895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 798285 |
End bp | 799358 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637770963 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_376800 |
Protein GI | 78184365 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0487359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAT ACCGCGTCGT TCTTTTGCCA GGCGATGGCA TTGGGCCTGA AATCACCGCT GTGGCCCGCC AGTTACTGGA TGTTGTGGCC CAGCGTCATG GGTTTCAGCT CATGTTTGAG GAGCAGCCGA TCGGCGGCTC TGCCATTGAT GCCACCGGTG AACCACTGCC TGCCAGCACG CTCACGGCAT GTCGGTCGGC CGATGCGGTG CTTCTGGCCG CGATTGGGAG CCCTCGTTTC GACAGCTTGC CCCGGGAGAA ACGACCGGAA ACGGGACTGC TTGGTCTTCG ATCAGGCCTC GAGCTGTTCG CCAATCTGAG GCCGGTGAAG ATCGTCCCGG CTTTGATTGG TGCCAGCAGC CTCAAGCAGG AGGTGATTGA AGGGGTCGAT CTGATGGTGG TTCGCGAGCT CACAGGTGGC ATTTATTTCG GTCAACCGAA GGGTCGGATT GAAGCCGATG GGGATGAACG AGGGTTCAAC ACGATGACCT ACTCCGCCTC AGAGGTGGAT CGCATTGCCA AGGTGGCTTT TGAGATCGCT GGAGAAAGAA ACAATCGCCT TTGTTCCGTG GATAAAGCCA ATGTTCTGGA TGTGAGCCAG CTTTGGCGGG ACCGCGTTGA TGCGATGGCG CCTCGTTATG GCGAGGTGGA TGTCAGCCAC ATGTACGTGG ACAATGCGGC GATGCAGCTG GTGCGTGACC CCCGCCAGTT CGACGTGCTG CTGACGGGCA ACTTGTTTGG CGACATCCTC AGCGATGAGG CTGCGATGCT TACGGGGTCG ATTGGAATGT TGCCCTCCGC CTCCCTCGGT AGCGATGGTC CTGGCTTGTT TGAGCCCGTG CATGGCTCTG CTCCAGACAT CGCCGGTCAA GACAAGGCCA ACCCCATGGC CATGGTGCTC TCCGCCGCGA TGATGCTGCG CATTGGTTTG AAGCAGAGTT CTGCCGCAGA CGACCTTGAA AGGGCCGTTG ATGCCGTTCT CGCCTCCGGA TTCCGAACCG GCGATTTGAT GTCGGAAGGC TGTACTCCGC TGGGATGTCA GGCCATGGGC GAGCAATTGC TTAAGGCTCT TTGA
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Protein sequence | MAQYRVVLLP GDGIGPEITA VARQLLDVVA QRHGFQLMFE EQPIGGSAID ATGEPLPAST LTACRSADAV LLAAIGSPRF DSLPREKRPE TGLLGLRSGL ELFANLRPVK IVPALIGASS LKQEVIEGVD LMVVRELTGG IYFGQPKGRI EADGDERGFN TMTYSASEVD RIAKVAFEIA GERNNRLCSV DKANVLDVSQ LWRDRVDAMA PRYGEVDVSH MYVDNAAMQL VRDPRQFDVL LTGNLFGDIL SDEAAMLTGS IGMLPSASLG SDGPGLFEPV HGSAPDIAGQ DKANPMAMVL SAAMMLRIGL KQSSAADDLE RAVDAVLASG FRTGDLMSEG CTPLGCQAMG EQLLKAL
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