Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0787 |
Symbol | lpxD |
ID | 3743894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 797209 |
End bp | 798252 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637770962 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_376799 |
Protein GI | 78184364 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.128799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCTTCA GCACCCTCCT TAAGGACCTG CAGACCGGTG AAGCCGAGCT TCGTTGGAGC CAGTGCGGCG CGGATCCAAT TCTGGCCGGT GCCGCTTCGC TAGAGCAGGC CAAGGGGGAT CAATTGAGCT TCCTCGAGAA GGGCAATGCG CTGATTGCCG CACTCACTGA AACGGGTGCT GGAGCTCTTT TGCTTCCCGA TCAACCCGAT CTGATCCAAT GCGCCAGTGA ACGGGGCATT GCTTTTGCGG TGTTGGCCAA TCCACGGTTG GCATTTGCTG AAGCGTTGGA GCGTCTCCAT CCACGGCTGC GACCTTTGGC GGAGATTCAT CCCTCCGCAG TGGTGGACGA GCGGGCGGTG GTTGGCCCTG GAACCTTTAT CGCCCCACGC GTCTGCATCG GCGCCTCGAG CAGAATTGGT GCCAATTGCA TCGTTCACCC AGGTGTGGTG ATTTACGACG ATGTGGAGGT GGGTGAGGGG TGTGAGCTGC ATGCCAACGC CGTGCTCCAT CCAGGCAGTC GACTCGGTCG TGGTTGTGTT GTGAATTCCA ATGCTGTGAT TGGCTCGGAG GGCTTTGGTT TTGTGCCGAC GCCCCGCGGA TGGCGAAAGA TGCCTCAAAC CGGTCAGGTG GTTTTAGAGG ACGGTGTTGA GGTGGGCTGT GGCAGCACGA TCGATCGCCC CTCCGTCGGA GAAACCCGCA TCGGTGCCGG ATCGAAAATC GACAACCTGG TTCAAATTGG CCATGGGGTG ACCACCGGGC GCGGTTGTGC ATTGGCGTCA CAAGTTGGCA TCGCCGGGGG CGCCAAGCTT GGTCATGGCG TGATTTTGGC CGGGCAGGTT GGTGTGGCTA ATCGAGCTGT GGTGGGTGAT GGGGCGATCG CGAGCTCGAA AAGTGGGATC CACGGTGAGG TGGCGCCCGG TGAGGTGGTG AGTGGTTATC CAGCGATTCC CAATCGACTC TGGCTGCGCT GTTCTGCGGC ATTCAGCAAG TTGCCTGAGA TGGCGAAGAC CCTTCGAGAG TTGAAGCGCG ACATCTCTCA GTAA
|
Protein sequence | MRFSTLLKDL QTGEAELRWS QCGADPILAG AASLEQAKGD QLSFLEKGNA LIAALTETGA GALLLPDQPD LIQCASERGI AFAVLANPRL AFAEALERLH PRLRPLAEIH PSAVVDERAV VGPGTFIAPR VCIGASSRIG ANCIVHPGVV IYDDVEVGEG CELHANAVLH PGSRLGRGCV VNSNAVIGSE GFGFVPTPRG WRKMPQTGQV VLEDGVEVGC GSTIDRPSVG ETRIGAGSKI DNLVQIGHGV TTGRGCALAS QVGIAGGAKL GHGVILAGQV GVANRAVVGD GAIASSKSGI HGEVAPGEVV SGYPAIPNRL WLRCSAAFSK LPEMAKTLRE LKRDISQ
|
| |