| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0727 |
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| Symbol | |
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| ID | 3742417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 746587 |
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| End bp | 748209 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637770901 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_376739 |
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| Protein GI | 78184304 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG ACCCAGGTCG CGTCCTGATT TTTGACACCA CCCTTCGGGA CGGTGAACAG
TCCCCAGGCG CCAGTCTCAA TCTTGAGGAG AAGCTGGCGA TCGCGCAGCA GTTGGCTCGC
CTGGGCGTCG ATGTGATCGA GGCCGGTTTC CCGTTTGCGA GTGCCGGCGA CTTCGCGGCT
GTCCAGCGGA TTGCCCAGCA GGTTGGTGGT GACAACGGTC CGATCATTTG TGGATTGGCC
CGTGCCTCGA AGGCCGATAT CAAGGCCTGT GCCGATGCTG TGGCACCAGC ACCCCGCGGC
AGGATCCATA CCTTTATTGC CACCAGCGAC ATTCATCTCG AGCACAAATT GCGCAAGAGC
CGCAAGGACG TGCTCGCAAT CGTGCCCGAG ATGGTGAGCT ATGCCCGCTC CCTGATCGAA
GACGTTGAAT TCTCCTGTGA AGACGCCGGG CGGAGTGATC CCGAGTTTCT TTACGAGGTG
ATCGAAGCGG CCATTGCCGC CGGTGCCACC ACCATCAATA TTCCCGACAC CGTCGGTTAC
ACCACACCAT CGGAGTTCGG TGGCCTGATT GCCGGGATTA ACCAGCACGT TCCCAACATT
GATGAGGCTG TGATTTCAGT CCATGGTCAC AACGATCTCG GACTGGCCGT CGCCAACTTC
CTCGAGGCCG TTAAAAACGG CGCTCGACAG TTGGAATGCA CCATCAACGG CATCGGAGAA
CGGGCCGGGA ATGCGTCCTT AGAAGAGTTG GTAATGGCGA TGCATGTGCG CCGCCGCTAC
TTCAATCCCT TCCTGGGGCG TAAGGAAGAC AGCCCCACGC CGCTGACGGC TGTGCGCACC
GAGGAGCTCA CCAAAACCTC GCGCTTGGTG TCGAATCTCA CCGGCATGGT GGTGCAGCCC
AATAAAGCGA TTGTTGGGGC CAATGCTTTT GCCCATGAGT CGGGCATTCA TCAGGACGGT
GTTTTAAAAA ATCGGCTCAC CTACGAGATC ATCGACGCGC GCACCGTTGG TCTGAGCGAT
AACCGCATCT CCTTGGGCAA ACTCAGCGGC CGCAGTGCCG TGCGGGCTCG CTTGGAAGAG
CTGGGTTACA ACCTCACCCG AGAGGATCTT GATGAGGCAT TTGCTCGTTT CAAAGACCTC
GCAGACCGCA AGCGCGAGAT CACCGACCGC GATCTTGAAG CGATCGTGAG TGAGCAGGTG
CAACAACCGG AAGCTCGTTT TCAACTCAAG TTTGTTCAGG TGAGTTGTGG CAGTACCTCG
CGCCCCACTG CGACGGTCGC CTTGATGGAT GAGGAGGGTG GCGAACGCAC CGTGTCAGCG
GTGGGTACCG GTCCGGTGGA TGCGGTGTGC CGAGCCCTTA ATTGCCTCGC TGATGTGCCC
AACGATTTGA TCGAGTTTTC CGTGAAGTCG GTTACTGAAG GGATTGATGC GATTGGAGAG
GTCACCATTC GCCTGCGACG TGATGGATCG TTGTATTCCG GCCATGCCGC CGACACCGAT
GTCGTGGTAG CGGCGGCGAT GGCCTTTGTG AACGCCCTCA ATCGGTTGGT TGCAGGCCAG
GAACGTCAGT CGTTGCACCC GCAAAAGGAT CCAGTCGTGC TGGACGCCAG GCCGACTCTC
TGA
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| Protein sequence | MAKDPGRVLI FDTTLRDGEQ SPGASLNLEE KLAIAQQLAR LGVDVIEAGF PFASAGDFAA
VQRIAQQVGG DNGPIICGLA RASKADIKAC ADAVAPAPRG RIHTFIATSD IHLEHKLRKS
RKDVLAIVPE MVSYARSLIE DVEFSCEDAG RSDPEFLYEV IEAAIAAGAT TINIPDTVGY
TTPSEFGGLI AGINQHVPNI DEAVISVHGH NDLGLAVANF LEAVKNGARQ LECTINGIGE
RAGNASLEEL VMAMHVRRRY FNPFLGRKED SPTPLTAVRT EELTKTSRLV SNLTGMVVQP
NKAIVGANAF AHESGIHQDG VLKNRLTYEI IDARTVGLSD NRISLGKLSG RSAVRARLEE
LGYNLTREDL DEAFARFKDL ADRKREITDR DLEAIVSEQV QQPEARFQLK FVQVSCGSTS
RPTATVALMD EEGGERTVSA VGTGPVDAVC RALNCLADVP NDLIEFSVKS VTEGIDAIGE
VTIRLRRDGS LYSGHAADTD VVVAAAMAFV NALNRLVAGQ ERQSLHPQKD PVVLDARPTL
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