| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0724 |
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| Symbol | |
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| ID | 3742414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 732875 |
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| End bp | 734098 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637770898 |
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| Product | lycopene cyclase, beta and epsilon |
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| Protein accession | YP_376736 |
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| Protein GI | 78184301 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.499997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTGATT GCGCTGATGT GTTGGTGATC GGGGGCGGTC CGGCCGCCCT TTGCATTGCT
TCTGAATTGC ATCAGCGCGG AGTGGTGGTT GAGGGCATTG CACCGAATCC GGTGGATGCC
CCTTGGCCGA ACACCTATGG GATTTGGGCA AAGGAGCTCG AGCTATTGGG CCTCGAGGAT
TTGCTGGAGC ACCGCTGGAG CAACACGGTG AGTTTTTACG GCGCAGGGGG CTCGGATTTA
GACGATCAAC CCACGCCGCA CGGGCTGGAT TACGGGTTGT TTGATCGGCA AAAGCTTCAG
CAGTACTGGT TGGGCCGTGG CGAGGGAATC ACCTGGCATC AAGACAGCGT CGATCGCATC
GAGGTGAAGG CTGACCGCAC TTGGGTGCAT TGCGCTTCTG GCGAACAACG CCTGGCCCGG
GTTGTGATTG ATGCCTCAGG CCATCGAACA CCGCATATCC GTCGTCCGGA TCAGGGGCCG
GTGGCTGGGC AAGCCGCCTA TGGCGTAGTG GGTCGCTTTG AAAAAGCTCC AGTGGAGCCA
GGCCAATTCG TGCTGATGGA TTTTCGCTGC GATCACCTCA GCCCAGAGCA ACGCCAGCAG
CCCCCCACCT TTTTGTATGC GATGGACTTT GGTGATGGGG TTTATTTCCT GGAGGAAACA
TCGTTGGCTT TAGCTCCGGC GGTGCCGGAA GCTGAGTTGA AGCAACGGCT GGAGCAACGT
TTGGCCAATG CGGGGAATGC AATCACCGAA GTGATGGATG TTGAACATTG TTTGTTTCCC
ATGAATTTGC CGTTGCCGGA TTTCCATCAG CCGGTGTTGG CCTTTGGCGG TGCGGCGAGC
ATGGTGCACC CAGCCTCGGG CTACATGGTG GGTGCGCTGT TAAGACGCGG GCCAGGTTTG
GCAAAAGCCT TGGCATCGGC TTTGAACGAG CAACCAGCGA TGGGATCTGC AGCTCTGGCG
CGTGTGGGCT GGCAAGCGCT GTGGCCAACG GAGTTGGTGT GGCGCCATCG CCTGTTTCAG
TTTGGTTTAG GCCGTTTGAT GGGCTTCGAT GAACGGCTGT TACGCCGGCA TTTCACCAGC
TTCTTTCAGT TGTCTCAAGC GGATTGGAGT GGCTTCCTCA CCAACACGTT GCCGTTGCCG
CAGCTGATGG CTGTGATGCT GCGCCTGTTT GCGATCTCAC CGTGGGATGT GCGGAGAGGG
TTGGTATTGG GGGCACCGCG CTAA
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| Protein sequence | MADCADVLVI GGGPAALCIA SELHQRGVVV EGIAPNPVDA PWPNTYGIWA KELELLGLED
LLEHRWSNTV SFYGAGGSDL DDQPTPHGLD YGLFDRQKLQ QYWLGRGEGI TWHQDSVDRI
EVKADRTWVH CASGEQRLAR VVIDASGHRT PHIRRPDQGP VAGQAAYGVV GRFEKAPVEP
GQFVLMDFRC DHLSPEQRQQ PPTFLYAMDF GDGVYFLEET SLALAPAVPE AELKQRLEQR
LANAGNAITE VMDVEHCLFP MNLPLPDFHQ PVLAFGGAAS MVHPASGYMV GALLRRGPGL
AKALASALNE QPAMGSAALA RVGWQALWPT ELVWRHRLFQ FGLGRLMGFD ERLLRRHFTS
FFQLSQADWS GFLTNTLPLP QLMAVMLRLF AISPWDVRRG LVLGAPR
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