Gene Syncc9902_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0702 
Symbol 
ID3744102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp713673 
End bp715223 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content58% 
IMG OID637770875 
ProductABC transporter substrate-binding protein 
Protein accessionYP_376714 
Protein GI78184279 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTT TGACGCAAAC CGGTTGTCAG GTCTCCTCAA CGAACCAGCG CATCACCGTT 
GCGTCTGCTG GGTCCATCAG CTCGTTGGAT CCAGCCCAAG TGAGCACGGT CCATAGCTTG
CAGCTGTTGA GCGCGATTGG GGATCCGCTC TACAGCCTGA ACAATGACGG GAGCCTGCAA
CCCCGCTTAG CAGCATCAGA GCCAACGATC AGCGCCGATG GCCGGCTCGT CACGATCCCG
CTGAGAACAG ATGTTCGTTT CCACGACGGC ACCCGCTTTG ATGCAAAGGC CATGGCCTTC
AGCTTGCGCC GGTTTCTGCG AATCGGAACG CTGAGCTATG TGGTGGGAGA TCGGATCAAA
GCTGTGGAGG TTGAAGCCCC TCATGTGCTG AGGCTGGAGC TCAACCGACG CTCCACGTCC
CTTGAGGGAC TGCTCACATC CATCAACCTC ACGCCCCTTT CTCCTCGGGC CTACGCCAAG
CACAAGGACA GCTTTCTGCA TGACAATTTT GTTGGCACAG GTCCTTACCG CCTCACCAAA
TTCAACGAGA AACAGCAACG GCTTGAACCC TTTGATCAGT ACTGGGGAGA TCCACCAAAA
AATCCTGGCC TTGATCTGAT CAGCCTCAGC AATTCCACCG CTCTCTTTGG TGCACTTCGC
AGCGGCGAAG TGGATGTGCT GCTCTCAGCC TCGATTGATG AAGACCAACG CCATGCCCTG
AACCAGCAAG CGAAGCGAGG GGACTTGCAT GAATCGGTTG GGCCAGCGAT GGAAATCGGC
TACATCACTC TGCTGAGTAA CACTGCACCG CTGAGCGACC AACGCCTGAG GCAAGCCATT
GCCTTAAGCC TGGATCGCGA TGAAGTGAGC GAGCGTGTGA GCTATGGATT GCGCCGACCG
TTGCGCGCTT TGATTCCACC CAGCCTCCCC GGGGGAGGCG TGGCCCCATG GCCGAAGCAC
AATCCCAAAG ATGCGAAAAC ACTGCTGAGG CAGTCGGGAT ACTGCGAAGG AACCCAACTC
GAAGTGCCCC TTACCTTCCG TTCCAATGTT CCCGCCGACA AACTTCTAGC GCTGACGTGG
CAAGCCCAAG TGCAGCGGGA TCTGGCTGAC TGCATGGTGC TCAAGCTGGA TGGCGTGGAA
TCAACCACCG TGTACCGCCA GCTCGGGGAA GGGGCGTTCA AGGCCGTCAT TCTTGATTGG
CTCGGGAGCT ATCCCGACCC CGAGGCTTAT CTCAATCCTT TGCTGAGTTG TTCCAACGCT
GAAGGGCATG TTTGCCTCGA TGGAGAAGCC GCGATCAGCG GAAGCTTCTG GAGCGCACCA
GGGCTTCAAA ACGCCTTGCA GGAAAGCGAC TCCGTTCGGG GCGCGCCGCG CGCCGCGATT
CTCAACACCA TCGAAGAGCT CACCGTGAAC GGAGCGGCCT ACATCCCCGT CTGGCTCGAA
TCCCCCAGGT CTTGGAGTCA ACGCAGCTTG AAGCCACCGC TCTACAACCG CAGCGGCTTC
CTACGCCTGG CTGAACTGGA ACGGGTGTCC CATAAGCAGG AGGGCAACTG A
 
Protein sequence
MAALTQTGCQ VSSTNQRITV ASAGSISSLD PAQVSTVHSL QLLSAIGDPL YSLNNDGSLQ 
PRLAASEPTI SADGRLVTIP LRTDVRFHDG TRFDAKAMAF SLRRFLRIGT LSYVVGDRIK
AVEVEAPHVL RLELNRRSTS LEGLLTSINL TPLSPRAYAK HKDSFLHDNF VGTGPYRLTK
FNEKQQRLEP FDQYWGDPPK NPGLDLISLS NSTALFGALR SGEVDVLLSA SIDEDQRHAL
NQQAKRGDLH ESVGPAMEIG YITLLSNTAP LSDQRLRQAI ALSLDRDEVS ERVSYGLRRP
LRALIPPSLP GGGVAPWPKH NPKDAKTLLR QSGYCEGTQL EVPLTFRSNV PADKLLALTW
QAQVQRDLAD CMVLKLDGVE STTVYRQLGE GAFKAVILDW LGSYPDPEAY LNPLLSCSNA
EGHVCLDGEA AISGSFWSAP GLQNALQESD SVRGAPRAAI LNTIEELTVN GAAYIPVWLE
SPRSWSQRSL KPPLYNRSGF LRLAELERVS HKQEGN