Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0702 |
Symbol | |
ID | 3744102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 713673 |
End bp | 715223 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637770875 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_376714 |
Protein GI | 78184279 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGCTT TGACGCAAAC CGGTTGTCAG GTCTCCTCAA CGAACCAGCG CATCACCGTT GCGTCTGCTG GGTCCATCAG CTCGTTGGAT CCAGCCCAAG TGAGCACGGT CCATAGCTTG CAGCTGTTGA GCGCGATTGG GGATCCGCTC TACAGCCTGA ACAATGACGG GAGCCTGCAA CCCCGCTTAG CAGCATCAGA GCCAACGATC AGCGCCGATG GCCGGCTCGT CACGATCCCG CTGAGAACAG ATGTTCGTTT CCACGACGGC ACCCGCTTTG ATGCAAAGGC CATGGCCTTC AGCTTGCGCC GGTTTCTGCG AATCGGAACG CTGAGCTATG TGGTGGGAGA TCGGATCAAA GCTGTGGAGG TTGAAGCCCC TCATGTGCTG AGGCTGGAGC TCAACCGACG CTCCACGTCC CTTGAGGGAC TGCTCACATC CATCAACCTC ACGCCCCTTT CTCCTCGGGC CTACGCCAAG CACAAGGACA GCTTTCTGCA TGACAATTTT GTTGGCACAG GTCCTTACCG CCTCACCAAA TTCAACGAGA AACAGCAACG GCTTGAACCC TTTGATCAGT ACTGGGGAGA TCCACCAAAA AATCCTGGCC TTGATCTGAT CAGCCTCAGC AATTCCACCG CTCTCTTTGG TGCACTTCGC AGCGGCGAAG TGGATGTGCT GCTCTCAGCC TCGATTGATG AAGACCAACG CCATGCCCTG AACCAGCAAG CGAAGCGAGG GGACTTGCAT GAATCGGTTG GGCCAGCGAT GGAAATCGGC TACATCACTC TGCTGAGTAA CACTGCACCG CTGAGCGACC AACGCCTGAG GCAAGCCATT GCCTTAAGCC TGGATCGCGA TGAAGTGAGC GAGCGTGTGA GCTATGGATT GCGCCGACCG TTGCGCGCTT TGATTCCACC CAGCCTCCCC GGGGGAGGCG TGGCCCCATG GCCGAAGCAC AATCCCAAAG ATGCGAAAAC ACTGCTGAGG CAGTCGGGAT ACTGCGAAGG AACCCAACTC GAAGTGCCCC TTACCTTCCG TTCCAATGTT CCCGCCGACA AACTTCTAGC GCTGACGTGG CAAGCCCAAG TGCAGCGGGA TCTGGCTGAC TGCATGGTGC TCAAGCTGGA TGGCGTGGAA TCAACCACCG TGTACCGCCA GCTCGGGGAA GGGGCGTTCA AGGCCGTCAT TCTTGATTGG CTCGGGAGCT ATCCCGACCC CGAGGCTTAT CTCAATCCTT TGCTGAGTTG TTCCAACGCT GAAGGGCATG TTTGCCTCGA TGGAGAAGCC GCGATCAGCG GAAGCTTCTG GAGCGCACCA GGGCTTCAAA ACGCCTTGCA GGAAAGCGAC TCCGTTCGGG GCGCGCCGCG CGCCGCGATT CTCAACACCA TCGAAGAGCT CACCGTGAAC GGAGCGGCCT ACATCCCCGT CTGGCTCGAA TCCCCCAGGT CTTGGAGTCA ACGCAGCTTG AAGCCACCGC TCTACAACCG CAGCGGCTTC CTACGCCTGG CTGAACTGGA ACGGGTGTCC CATAAGCAGG AGGGCAACTG A
|
Protein sequence | MAALTQTGCQ VSSTNQRITV ASAGSISSLD PAQVSTVHSL QLLSAIGDPL YSLNNDGSLQ PRLAASEPTI SADGRLVTIP LRTDVRFHDG TRFDAKAMAF SLRRFLRIGT LSYVVGDRIK AVEVEAPHVL RLELNRRSTS LEGLLTSINL TPLSPRAYAK HKDSFLHDNF VGTGPYRLTK FNEKQQRLEP FDQYWGDPPK NPGLDLISLS NSTALFGALR SGEVDVLLSA SIDEDQRHAL NQQAKRGDLH ESVGPAMEIG YITLLSNTAP LSDQRLRQAI ALSLDRDEVS ERVSYGLRRP LRALIPPSLP GGGVAPWPKH NPKDAKTLLR QSGYCEGTQL EVPLTFRSNV PADKLLALTW QAQVQRDLAD CMVLKLDGVE STTVYRQLGE GAFKAVILDW LGSYPDPEAY LNPLLSCSNA EGHVCLDGEA AISGSFWSAP GLQNALQESD SVRGAPRAAI LNTIEELTVN GAAYIPVWLE SPRSWSQRSL KPPLYNRSGF LRLAELERVS HKQEGN
|
| |