| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0695 |
|---|
| Symbol | |
|---|
| ID | 3744095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 705675 |
|---|
| End bp | 706766 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637770868 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | YP_376707 |
|---|
| Protein GI | 78184272 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.189938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAAG CCGGAATTGT TGGATTGCCC AATGTGGGCA AGTCCACGCT GTTCAACGCA
CTGGTGGCCA ACGCTCAGGC GCAAGCTGCC AATTTCCCGT TCTGCACGAT CGAGCCGAAT
GTGGGCACGG TGTCGGTTCC GGATGATCGT CTTCAGCTGC TCACGGACCT CAGCAAGAGT
CAAAACACCG TTCCTACGCG AATGGAGTTT GTGGATATCG CTGGCTTGGT GAAGGGGGCC
AGCCAGGGCG AAGGTCTGGG CAACAAATTT CTGTCCAACA TCCGCGAAGT CGACGCCATC
GTGCATGTGG TGCGATGTTT TGAAGACGAC GATGTGATTC ATGTGTCGGG CTCCGTGGGG
CCAGCGCGGG ATGCTGAGGT GATCAATCTG GAGTTGGGCC TCGCCGATCT CTCGCAAATC
GAGAAGCGCC GTGAACGTCT AAAAAAGCAA ATGCGCACCA GTACGGAGGC GCAAGTTGAA
GATGCGGCCC TTGAGCGCAT TCAGCAGGTG TTGGAACAGG GAGGCGCAGC GCGGAGTGTG
GAGATCACCG CAGAGGAGGA GGGAATGATC AAACCTCTGG GTTTGCTCAC GGCGAAGCCG
ATCATCTATG CCACCAACGT GAGTGAAGAC GACCTCGCTG ATGGCAATCG TTATTGCTCT
GAAGTGATGG CTGTGGCGGA ACAGGAAGGG GCTGAAACGG TGAGAATTTC AGCGCAAGTG
GAAGCGGAAC TTGTGGAACT TGGCGACGAA GAACGGGCCG ACTATCTCGA AGGCTTAGGG
GTGAGTGAAG GGGGGCTTCG CAGTTTGATT CGCGCCACCT ATCGGCTTCT TGGGCTGCGG
ACCTATTTCA CGACAGGCGA AAAAGAAACT CGGGCTTGGA CGTTTAAGTC AGGGATGACA
GCACCGCAAA CGGCTGGTGT GATCCATACC GACTTTGAGC GTGGGTTCAT CCGAGCTCAG
ACGATTGGCT GCGAGAAGTT GCTGGAAGCT GGATCTCTGG TGGAAGCCCG AAATAAGGGT
TGGTTACGCA GTGAAGGTAA GGATTATGTG GTGGCAGAAG GGGACGTCAT GGAGTTTTTA
TTCAACGTTT AA
|
|---|
| Protein sequence | MLKAGIVGLP NVGKSTLFNA LVANAQAQAA NFPFCTIEPN VGTVSVPDDR LQLLTDLSKS
QNTVPTRMEF VDIAGLVKGA SQGEGLGNKF LSNIREVDAI VHVVRCFEDD DVIHVSGSVG
PARDAEVINL ELGLADLSQI EKRRERLKKQ MRTSTEAQVE DAALERIQQV LEQGGAARSV
EITAEEEGMI KPLGLLTAKP IIYATNVSED DLADGNRYCS EVMAVAEQEG AETVRISAQV
EAELVELGDE ERADYLEGLG VSEGGLRSLI RATYRLLGLR TYFTTGEKET RAWTFKSGMT
APQTAGVIHT DFERGFIRAQ TIGCEKLLEA GSLVEARNKG WLRSEGKDYV VAEGDVMEFL
FNV
|
|---|
| |