Gene Syncc9902_0669 details

Gene Information

• Locus tag: Syncc9902_0669
• ID: 3743625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 681143
• End bp: 681679
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637770841
• Product: photosystem I assembly protein Ycf4
• Protein accession: YP_376681
• Protein GI: 78184246

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.175754
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCAG CAGTGCTGGA GCAATCGGTG CTCGGCTCAA GGCGACTTTC TAATTTTTTG 
GTGGCCGCAG CCGTCAGTGT TGGAGGTGTT GGCTTCTTGT TGGCGTCACT TTCCAGCTAT 
CTCGGACAAG ACCTGTTGCC CTTTGGGCAT CCTGCAGCTC TGATTTTTGT TCCGCAGGGC 
CTGGTGATGG GCCTGTACAG CATCGCCGCT GCACTGTTGG CCTCCTACCT CTGGTATGTG 
ATCGCTGTCG ACGTGGGCTC TGGAAGCAAT CGTTTCGATA AAGAATCTGG TGTTGTGGTG 
ATCAGCCGTC GGGGTTTCCG TCGCCCGGTT TGCGTGGAAT TTCCCTTGAA AGATGTCAAG 
GCGGTGAAAG TGGAAGTGCG TGATGGGTTC AATGCCCGCC GCCGCGTGTC TCTGCGTCTC 
CAGGGGCGTC GCGATCTTCC CCTAACCCGG GTGGGTGAGC CGCTGCCATT GGCTCAGCTC 
GAGCAGGAAG GAGCTGAACT CGCCCGTTTT CTTGGCGTCA ATCTCGAAGG GCTTTGA 

 

Protein sequence

MSAAVLEQSV LGSRRLSNFL VAAAVSVGGV GFLLASLSSY LGQDLLPFGH PAALIFVPQG 
LVMGLYSIAA ALLASYLWYV IAVDVGSGSN RFDKESGVVV ISRRGFRRPV CVEFPLKDVK 
AVKVEVRDGF NARRRVSLRL QGRRDLPLTR VGEPLPLAQL EQEGAELARF LGVNLEGL