| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0667 |
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| Symbol | |
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| ID | 3743623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 678525 |
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| End bp | 679913 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637770839 |
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| Product | photosynthetic II protein PsbC |
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| Protein accession | YP_376679 |
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| Protein GI | 78184244 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.329399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAACGC CCTTTAATGC TGGTCTTGTC GCCACTGGCG GCAAAGACCT CGACTCCACT
GGCTATGCCT GGTGGTCTGG AAATGCCCGC CTGATCAACC TTTCAGGCCG TTTGCTTGGC
GCCCACGTGG CCCATGCCGG TTTGATGGTG TTCTGGGCTG GCGCAATGAT GCTGTTCGAG
GTGAGTCACT TCACCTTCGA TAAGCCCATG TATGAGCAGG GCTTCATCTG CATGCCCCAC
GTCGCAACCC TCGGTTACGG CGTAGGACCC GGCGGAGAAG TCACTGATCT CTTCCCATTC
TTTGTGGTTG GTGTTCTGCA CCTGATCAGC TCAGCCGTTC TTGGCTTGGG TGGTCTGTAC
CACGCCCTGC GTGGTCCTGA GATTTTGGAG AACTATTCCT CCTTCTTCTC CCAGGACTGG
CGCGACAAAA ATCAGATGAC CAACATCATT GGTTATCACC TGATTCTTCT TGGCGTCGGC
TGCTTGCTGC TGGTCTTTAA GGCCATGTTC TTCGGCGGCG TCTACGACAC CTGGGCCCCC
GGCGGTGGCG ACGTTCGTCT GATCACGAAC CCCACCCTCG ACCCCGGTGT GATCTTCGGT
TATCTCTTCC GCGCCCCCTT TGGTGGCGAA GGTTGGATCA TCGGAGTGAA CTCGATGGAA
GACATCATTG GTGGTCACAT CTGGTTGGGC CTAACGCTGA TCTTCGGTGG CATTTGGCAC
GCCATCACCA AGCCTTTCGG CTGGGTGCGT CGTGCCTTCA TCTGGAATGG TGAGGCCTAC
CTGAGCTACA GCCTGGGTGC CTTGAGCTTC ATGAGCTTCA TCGCATCGGC CTACATCTGG
TTCAACAACA CCGCCTATCC CTCTGAGTTC TGGGGCCCTA CCAACGCGGA GGCATCCCAA
GCTCAAAGTT TCACCTTCCT GGTGCGTGAC CAACGCCTTG GAGCCAACAT CGGTTCTGCC
ATGGGTCCCA CCGGCCTCGG CAAATACCTG ATGCGCTCAC CAACCGGTGA AATCATCTTC
GGTGGCGAAA CCATGCGTTT CTGGGACTTC CGTGGTCCTT GGTTGGAGCC CCTCCGTGGC
CCCAACGGTT TGAGCCTCGA CAAATTGCAA AATGACATTC AGCCATGGCA AGTGCGCCGT
GCAGCTGAGT ACATGACGCA CGCCCCCAAC GCTTCTCTGA ACTCCGTTGG CGGCATCATC
ACCGAGCCAA ACTCGGTGAA CTACGTGAAC CTTCGTCAGT GGCTGGGAGC AGCACAATTC
GTGCTCGCTT TCTTCTTCCT GGTGGGTCAC CTCTGGCATG CAGGCCGCGC CCGCGCCGCC
GCAGCTGGTT TTGAAAAAGG CATCGATCGC AAAGCAGAAC CCGTTCTCGG AATGCCGGAT
CTCGACTGA
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| Protein sequence | METPFNAGLV ATGGKDLDST GYAWWSGNAR LINLSGRLLG AHVAHAGLMV FWAGAMMLFE
VSHFTFDKPM YEQGFICMPH VATLGYGVGP GGEVTDLFPF FVVGVLHLIS SAVLGLGGLY
HALRGPEILE NYSSFFSQDW RDKNQMTNII GYHLILLGVG CLLLVFKAMF FGGVYDTWAP
GGGDVRLITN PTLDPGVIFG YLFRAPFGGE GWIIGVNSME DIIGGHIWLG LTLIFGGIWH
AITKPFGWVR RAFIWNGEAY LSYSLGALSF MSFIASAYIW FNNTAYPSEF WGPTNAEASQ
AQSFTFLVRD QRLGANIGSA MGPTGLGKYL MRSPTGEIIF GGETMRFWDF RGPWLEPLRG
PNGLSLDKLQ NDIQPWQVRR AAEYMTHAPN ASLNSVGGII TEPNSVNYVN LRQWLGAAQF
VLAFFFLVGH LWHAGRARAA AAGFEKGIDR KAEPVLGMPD LD
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