Gene Syncc9902_0660 details

Gene Information

• Locus tag: Syncc9902_0660
• ID: 3743616
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 669540
• End bp: 671477
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637770832
• Product: putative long-chain-fatty-acid--CoA ligase
• Protein accession: YP_376672
• Protein GI: 78184237
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1022] Long-chain acyl-CoA synthetases (AMP-forming)

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.711243
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGCCA GCTGGACCCC TACCGCTCGG GAAACGACGT CGCTGCAACG TCATGGCCAT 
ACCCAGAGCT TCACCCGGGT GGATTCCATG TGGCCATGGT TGGCGGATCG GTATGGAACG 
ATCACCGCCC TCGATGCTCC CCACGCCACC CATCCAGAAC AGTTCAGTTT TGGTGAATTG 
GCCGAACGCA TCGCGACGGC TGCTGCCGCG TTTGACGCCA AGGGTGTTCG AAAGGGTGAC 
GTTGTGGCGT TGTTTTCTGA GAACAGTCCC CGCTGGTTGG TGGCCGACCA AGCCCTGATG 
CGTTGTGGTG CCGCTGATGC TGTTCGGGGT GCGTCTGCCC CTGTTGAGGA GCTCCGTTAC 
ATCCTTGAGG ATTCAAAGGC CACAGCCCTT GTGGTCCAGA ACGCTGATCT GTGGCGCCGC 
TTGGCATTGA CGCCGGCGCA GCGAACGCGC TTGAAGGTGG TGGTGCAGCT CGAGGGTGAT 
CCGGTGGATG GACTCACCGG TTGGGACACG CTGCTGTCGT CTGCGGCTGG CCTCTCTCCG 
GTGACGCGTA CGCAAAACCT TGATGGAGAC GGGAAGATCG CAGCAAACCA GGTGGCCACG 
ATTTTGTACA CCTCAGGTAC GACCGGTCAG CCGAAGGGGG TGCCGCTCAC GCACGCCAAT 
TTGTTGCACC AAATTCGCTC CTTGGCCTGT GTGGCCTATC CCAAGCCAGG GGATCCGGTG 
CTGAGCGTTT TGCCGATTTG GCATGCCTAT GAGCGCAGTG CCAGTTACTT CTTTCTGTCG 
TGTGCCTGCA CACAGACCTA CACCACGATT AAGCAACTCA AAAAGGATCT GCCCAGGGTG 
CAACCGATTG CGATGGCCAC CGTGCCACGG TTGTGGGAGT CGGTGCAGGC TGGCTTCGAG 
GATGTGGTGA AAACGTTTCC GCCTTCCCGA CAACGCTTGC TTCGAGCTGC CCTCAGCAAC 
AGTTCTGCTC AGCGACAAGC CCTGCGTCGG GCGAGCAACT TGATGTTGGA GCCTGTGCCC 
TGGGCAGGAC GATTCCAGGC CGCTGGGGTG GCCCTTCTCC GCTGGCCGCT ACATGCTTTG 
GCATCGGCCT TGTTGTGGCC CAAGGTGCGC CGTCAGCTGA GCGGCGGGCA GCTTGCTTAT 
CCCATCAGTG GAGGAGGAGC GATTGCCCCC CACATCGATG CGTTTTTTGA AGCGGTGGGC 
ATTGAACTTT TGGTGGGCTA TGGCCTCACT GAAACCAGTC CGGTGATTAG TTGTCGGCGC 
CCTTGGCACA ACATTCGCGG CAGTTCGGGT TTGCCGTTGC CAGGCACGGA ATTCCGGATT 
GTGGATCCTG AATCTGGAAC GTTGCTGGGG TGTCGCCAGA GGGGACGCGT TCTGGTGCGC 
GGACCGCAGG TGATGGCGGG TTATTGGGGC AAACCCGATG CCACAGCCAA AGTTCTTGAC 
GCTGATGGCT GGTTTGATAC TGGTGATCTC GGAATGCTCC TGGCGGATGG CTCGGTGGCT 
TTAACGGGCC GTGCGAAGGA CACGATCGTC TTAAGCAGTG GCGAAAACAT TGAGCCCGGA 
CCGTTGGAGG AAGTCCTGGT GGCGAGTCCA CTGATCGAGC AGGTGATGCT GGTGGGGCAG 
GACGAGCGCC AATTGGCAGC GTTAATCGTG CCTCGGGCCG ATGTGATTGT TGTTTGGGCT 
GGTCAGCAAG GACTCAGCCT TGCAAACGAC CTCGGTGGAA AGCCAGGTGA TCAGGCGCTG 
CTCCGACTGC TGATGCAGGA ATGCAATCGA CTGTTGAAGC AGCGTGTTGG CGCTCGCGGA 
GATGAACGGC TGGCGGGGGT GGTTTTGGTG GATCCCTTCA CCATCGACAA CGGCTTACTC 
ACCCAAACCT TGAAGCAACG TCGCGACCGA ATCACCGCCC GGGACAACAC CCTGATCCGT 
GGGCTATACA GCCGTTAG 

 

Protein sequence

MTASWTPTAR ETTSLQRHGH TQSFTRVDSM WPWLADRYGT ITALDAPHAT HPEQFSFGEL 
AERIATAAAA FDAKGVRKGD VVALFSENSP RWLVADQALM RCGAADAVRG ASAPVEELRY 
ILEDSKATAL VVQNADLWRR LALTPAQRTR LKVVVQLEGD PVDGLTGWDT LLSSAAGLSP 
VTRTQNLDGD GKIAANQVAT ILYTSGTTGQ PKGVPLTHAN LLHQIRSLAC VAYPKPGDPV 
LSVLPIWHAY ERSASYFFLS CACTQTYTTI KQLKKDLPRV QPIAMATVPR LWESVQAGFE 
DVVKTFPPSR QRLLRAALSN SSAQRQALRR ASNLMLEPVP WAGRFQAAGV ALLRWPLHAL 
ASALLWPKVR RQLSGGQLAY PISGGGAIAP HIDAFFEAVG IELLVGYGLT ETSPVISCRR 
PWHNIRGSSG LPLPGTEFRI VDPESGTLLG CRQRGRVLVR GPQVMAGYWG KPDATAKVLD 
ADGWFDTGDL GMLLADGSVA LTGRAKDTIV LSSGENIEPG PLEEVLVASP LIEQVMLVGQ 
DERQLAALIV PRADVIVVWA GQQGLSLAND LGGKPGDQAL LRLLMQECNR LLKQRVGARG 
DERLAGVVLV DPFTIDNGLL TQTLKQRRDR ITARDNTLIR GLYSR