| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0642 |
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| Symbol | |
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| ID | 3743464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 655426 |
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| End bp | 656496 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637770814 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_376654 |
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| Protein GI | 78184219 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family
[TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATG AAACTGAGCG GAGTGGTCTT GATCATCCCC AACCTTTGAA CCAAAGCCTG
CAAACACCCA TTCATCTTCC GGGCAATGGC ACCTGCCGTC AGCTTCATTC GCGGGTCCTG
CAATCGCCTT TAGCGGGCGT AACCGACAAG ATTTTTCGTG GGTTAGTGCG GCGATGGTCT
CGGGATTCCT TGCTGTTCAC AGAAATGGTG AACGCCACAA GCCTGGAGCT CGGCCACGGT
TACGGAAAAA TGGACGACCT CAAGGCCGAG GAAGGCCCCA TCGCGGTTCA ACTCTTCGAT
CACCGCCCTC ACGCGATGGC CCACGCAGCA CGCCGTGCCG AACAGGCTGG GGCCTTTCTT
ATCGATATCA ACATGGGATG TCCAGTCCGA AAAATCGCGA AGAAAGGCGG AGGTTCAGGA
CTCATCCGTG ACCCGAATCT CGCCACTCAG ATTTTGGAGG CGGTCGTTGA CGCTGTATCG
ATTCCGGTCA CCGTAAAAAC GCGCCTCGGT TGGTGTGGGA GCAGTTCGGA CCCGATCACT
TGGTGCCGAC AACTTCAAAA TGCTGGCGCC CAAATGTTGA CCTTGCATGG ACGAACCCGG
GAACAGGGTT TCAAAGGCCA AGCGAATTGG AATGCGATCG CGGAAGTCAA GCAAGCCTTA
ACGATTCCCG TGATTGCCAA TGGAGATATC AACAGCCCCA CCGATGCACT TCGGTGTTTA
GAGATCACAG GAGCCGATGG CGTGATGGTG GGTCGCGGAA CCATGGGGTC ACCCTGGCTG
GTGGGACAAA TTGAAGCCGC ATTCATGAAT CGACCGATTC CTGCAACACC AGACAGTGGT
GCCAGACTTC ACTTAGCCAA AGAACAGTTG CACGATTTGG TGTCATCCAG AGGATCCCAC
GGCCTCCTCA TTGCACGAAA ACATATGAGC TGGACATGCA CTGGGTTCCC AGGAGCACCA
CAACTCCGCC ATTCCTTAAT GCGCGCAACA ACACCAGACG ATGCCTACCA ATTAATCGAT
AACGCCATCA ACTCCTTACG CACAGTCGGG ATCGCACAAG AAGCAAAATA A
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| Protein sequence | MADETERSGL DHPQPLNQSL QTPIHLPGNG TCRQLHSRVL QSPLAGVTDK IFRGLVRRWS
RDSLLFTEMV NATSLELGHG YGKMDDLKAE EGPIAVQLFD HRPHAMAHAA RRAEQAGAFL
IDINMGCPVR KIAKKGGGSG LIRDPNLATQ ILEAVVDAVS IPVTVKTRLG WCGSSSDPIT
WCRQLQNAGA QMLTLHGRTR EQGFKGQANW NAIAEVKQAL TIPVIANGDI NSPTDALRCL
EITGADGVMV GRGTMGSPWL VGQIEAAFMN RPIPATPDSG ARLHLAKEQL HDLVSSRGSH
GLLIARKHMS WTCTGFPGAP QLRHSLMRAT TPDDAYQLID NAINSLRTVG IAQEAK
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