| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0638 |
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| Symbol | |
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| ID | 3743460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 649315 |
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| End bp | 652233 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637770810 |
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| Product | glycosyltransferase |
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| Protein accession | YP_376650 |
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| Protein GI | 78184215 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.770569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTCAA GCCAAAGTCT TTCAGATCGA TCGCTCACGC AGGCTCTACG ACAAGTCGTT
GAGCGGGGAT TTGGCTTGGA AGACTTACAG CCAGCCTTGG CGGAGCGAAA TCCAGGCCTA
CCAGTGGCCT GCCTCGATCC TCGCCTGATC CCGATTCCTT TACTGGTGAG CCCCCAGAGC
TGGGCACCAC AAGACAGCGG CATCGATGAA AAAGCCCTGC TTCAAGCCCA TCCAGATCTC
ATCGGCGCCA CAACGCTTGT GAGCTCTGGG CGACTCACCC AGATCGTCCA TGGAGAGGCA
TGCCTGTATG CAGACCTACC TCCAATCCAC TTACAGGCCT ACCTCGATGG TCTCCGTCCA
GCCGCGAAAA AAGAACTTCA ACGCCAAAAA GCCTGCGCCC TTGAGCACCT AGCCACCCTC
GGCTGGAAAC GGTTCCGCCA TCGGCGTGCT CTTGGGAAAG ATCTCGACCG CTATCAACCG
GAACCTGATG CAGCCATACA AACCGCTCAC TCACCAAACA ATCCATTGCC ACTGGTGTTG
GTGGTTTTAC AAACGGAGCC TCGACCAGCC AACAACGCTG CCAGCACTCT TGACAGCAAC
ACCACTGACG GAAACACCGT TGGCTGGAAT CACATCATCC ATGGACATCT CGACGATCTC
AACTCGGTGT GGTCGGCACT GCCTTCCTCC AGCGAGGCTC TGGTGAGCTT TTGCCATTGC
GATGACCGCC TGGCACCACA AGCACCACTA CTGCTGAGTC GAGCCGCAGA AGCTTCACAC
AAGGCTGAGT TGTTCAGCTC TGATGAAACA TTGCAGTGGA GTGCCGATCC GACACAGCCC
CCTGGCAACC GTCAAAACCA CGTATCCGCC CTGCCTTGGC GCCTACTCAC CCGAGGGTGT
ATCGGTGGGC TAGTGACGCT TCGACTCAGT CGATTGCGCC AATTAGACCT CCCAAATCGA
CGCCTATGTC TTCACAATCT GATCCTTGAT CTCAGCCTTC AAGTCAGTGC ACAACGCCAC
ACATGTGAGC ATTTAAGCCA GGCTCTACTG AGCCGAAAAA TCACCACGAA TCCCGCCGTT
CCAGAAGTGG CATCCCCCAA AGATCGTCTG GTTTTCAGTG CCGCACAATG TCAAGAATCT
CTGAGTATTT GTCGAGAACG CGGAGCTCAT TTTCTGACGA CTGGCGGGGT AATTACGGCC
CATCCCAAAT GGTCTGGATG CCATCAAGTG CATTGGACTC CCCCAGAGAA CACATTTGTT
TCAATTCTGA TTCCCTTTCG CGATAGCGCA GCACTCACCA AAGTTTGCGT GGAGTCGATT
CGCCGTTGTG CTGGAGATAT TCCCTTTGAA CTGATCTTGA TCGACAACGG CAGCACGAGT
ACAGACACTT TGACTTGGCT CAATCATCAG CGCGTTCTGA GCGATGTCAC AGTGCTGCGT
TTGGATTGCG ACTTTAATTA CGCACAGATT CATAATTTTG CACGTCCTTA TTGCCAGGGC
ACACATCTCT TACTTCTAAA TAACGATATT GAAGTCCGCT CGGAAAATAT TCTTCAAAAA
CTCCTCGATC CTTTTGCAGT GAGCCACACA GTGGCCGTTG GTGCTCGACT GCGTTACCCC
AACAACAGCA TCCAACATCA TGGGGTCGTG CTCATCAAAG GGGAACGACG CTGTGTGTTG
GAGCCGGGCA AACACCTGTC TGAACTCAAC ACCATTGATA TGTTCACTCC CTTGGGAGTG
CAAGAAGAGT GGATTGCAGC CACTGCTGCC TGTTTGATGC TTAGAACCGC TGATTTTGAT
CAAATTGGTG GGTTCGATGA ACAACTCGCA GTGGTCTTCA ACGATGTAGA TCTATGCCTG
CGATTGCGAC AACTGGAAGG CTCTGTTGTT GTCACGCCGT TTGTTGACAT CATTCACCAT
GAATCAGTGA GTCGCGGCAA AGATCAATCA GGAGAGGCCC TAGCCCGACA TCAACGCGAG
TCGGGTTATT TGCGACATAA ACACGCCGGA CTCTTTGAAA CTGGAGATCC ACTATTTAGT
CACAACATCC ATCCCCACAG CAACCGCTTC CAACCCAAAG ATCCTGCACC CCAGTCGTCT
GGCCGTGTGA AGCCTCAGCA GATCAGCCAC TGGAAGCAAC GGGGCTGGAA ACCAAATAAC
AAAAAGCCCT TGATTGTGAT GGCTCATTTT GATCCAACCA ACCGTTTACG CCCAGATCTG
CTCAAACTTT TGGAGAGTTA CGCACAATTT GGAGATGTCG TTTTGGTCTC GGCTTCGCCA
GGCCTCCGAT GGCACTGGAA CACCTTGCGA AAGCTCAAAA GATGTTGCCG CGCCATTTTG
ATTCGCCGCA ACGAAGGATA TGACTTTGGC AGCTGGATGG CAGCCCTGCA TTCGCTTAAA
AGAGATATTG ACAACATCGA TCAACTTATT CTCACAAATG ACAGTTTTTG GGGGCCAATC
ACACCCCTCG ACGATTTATT TCAACGACTA AAAGCAAGCA GTGCAGACGT CATTGGACTC
ACCGACGACC AAATGTATGC ACCCCATCTT CAATCTGCTT TTCTTGCATT TCGAAAACCA
GTAATTCAAA GTGATGCATT TCAAAGCTTT TGGAATCAAC TGGAATCATG GCCTCGCAAA
CGTGATTTGA TCAAAAAATA CGAAGTTGGT CTACCAGTTT GCCTACAAAA AGCCGGGTTT
AAAACAGAAA GTCTTTACAC AAAACATGCC AATGGAAATA TTTTGCATAC AGCCTGGAAA
GAGTTAATTG AAGCAAAAAA CTTTCCCTTT CTGAAGGTTT CACTGCTTCG GGATAATCCG
ATGCATCAAG AGATTGATGC CTGGGAGCAG GTGATCTCGG AACGGAATCC CGTCTTGGCC
GCTCAAATCC GATCACAACT CCAACAGCCA AAATCCTGA
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| Protein sequence | MVSSQSLSDR SLTQALRQVV ERGFGLEDLQ PALAERNPGL PVACLDPRLI PIPLLVSPQS
WAPQDSGIDE KALLQAHPDL IGATTLVSSG RLTQIVHGEA CLYADLPPIH LQAYLDGLRP
AAKKELQRQK ACALEHLATL GWKRFRHRRA LGKDLDRYQP EPDAAIQTAH SPNNPLPLVL
VVLQTEPRPA NNAASTLDSN TTDGNTVGWN HIIHGHLDDL NSVWSALPSS SEALVSFCHC
DDRLAPQAPL LLSRAAEASH KAELFSSDET LQWSADPTQP PGNRQNHVSA LPWRLLTRGC
IGGLVTLRLS RLRQLDLPNR RLCLHNLILD LSLQVSAQRH TCEHLSQALL SRKITTNPAV
PEVASPKDRL VFSAAQCQES LSICRERGAH FLTTGGVITA HPKWSGCHQV HWTPPENTFV
SILIPFRDSA ALTKVCVESI RRCAGDIPFE LILIDNGSTS TDTLTWLNHQ RVLSDVTVLR
LDCDFNYAQI HNFARPYCQG THLLLLNNDI EVRSENILQK LLDPFAVSHT VAVGARLRYP
NNSIQHHGVV LIKGERRCVL EPGKHLSELN TIDMFTPLGV QEEWIAATAA CLMLRTADFD
QIGGFDEQLA VVFNDVDLCL RLRQLEGSVV VTPFVDIIHH ESVSRGKDQS GEALARHQRE
SGYLRHKHAG LFETGDPLFS HNIHPHSNRF QPKDPAPQSS GRVKPQQISH WKQRGWKPNN
KKPLIVMAHF DPTNRLRPDL LKLLESYAQF GDVVLVSASP GLRWHWNTLR KLKRCCRAIL
IRRNEGYDFG SWMAALHSLK RDIDNIDQLI LTNDSFWGPI TPLDDLFQRL KASSADVIGL
TDDQMYAPHL QSAFLAFRKP VIQSDAFQSF WNQLESWPRK RDLIKKYEVG LPVCLQKAGF
KTESLYTKHA NGNILHTAWK ELIEAKNFPF LKVSLLRDNP MHQEIDAWEQ VISERNPVLA
AQIRSQLQQP KS
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