| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0635 |
|---|
| Symbol | |
|---|
| ID | 3742638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 646811 |
|---|
| End bp | 647698 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637770807 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_376647 |
|---|
| Protein GI | 78184212 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.711737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT TGCTTACCGG AACGGGAGGG CAACTGGGCC AAGCCTTACT GGATTCAAAG
CCTGACGCGG TTGAACTCAT CTCCACAACC CGTCAGGAAC TGGACCTCTC CAATGCGGAA
GCTTGCCGAT TGGCTGTCCA AAAGTATCAA CCCGACTGGG TTCTGAACGC AGGGGCCTAC
ACAGCTGTCG ATCAAGCGGA GTCCGAACCC GAGTTAGCCC ATGCCATCAA TGCCGGAGCA
CCTGAAGCCT TTGCGCAAGA ACTCGATCGC CAGGGTGGCC GGCTCCTACA GGTGAGCACC
GATTTTGTCT TTGATGGACA ACAGGGTTCT CCTTACCGTG TCGATCAACC CACGACGCCG
ATTGGTGTGT ATGGAACAAG TAAGGCCGCA GGTGAGCAAG CCATCCACAG AATCTTCGGA
GCCAACAACC CGCAAGGGGT CATCCTTCGC ACAAGCTGGG TTATGGGCCC AGTCGGTCGC
AATTTTGCCC GCACGATGCT GCGTCTTCAC CGCGAACGTG ACCAACTGAG TGTTGTTGCT
GATCAAGTGG GATGCCCTAG CAGCACCTTG AATTTGGCCA CTGCATGTTG GACAACGATC
ACACAGGGGT CGCAAACAAA CCTGCCACCG ATCATGCATT GGAGTGATGC AGGAGCCGCA
AGTTGGTACG ACGTGGCCGT GGCCATCGGT GAACTCGGCC ACTCACTTGG CTTGGTGGAC
ACACCCGCCA AGGTAAATCC GATCACCACA GCAGATTATC CAACCCCTGC CTCACGCCCG
AACTATTCCC TTCTCGATTG CACGACCACA CGAGCGGCGT TGCAGCTTGA TGGACAACAT
TGGCAAGAAG CCTTGAAACA GCTTCTGCTT CGAGTCCAAG CTGACTAA
|
|---|
| Protein sequence | MKILLTGTGG QLGQALLDSK PDAVELISTT RQELDLSNAE ACRLAVQKYQ PDWVLNAGAY
TAVDQAESEP ELAHAINAGA PEAFAQELDR QGGRLLQVST DFVFDGQQGS PYRVDQPTTP
IGVYGTSKAA GEQAIHRIFG ANNPQGVILR TSWVMGPVGR NFARTMLRLH RERDQLSVVA
DQVGCPSSTL NLATACWTTI TQGSQTNLPP IMHWSDAGAA SWYDVAVAIG ELGHSLGLVD
TPAKVNPITT ADYPTPASRP NYSLLDCTTT RAALQLDGQH WQEALKQLLL RVQAD
|
|---|
| |