| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0627 |
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| Symbol | |
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| ID | 3742630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 634320 |
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| End bp | 637100 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637770798 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_376639 |
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| Protein GI | 78184204 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.675765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAG CTCAGCCGGA ACCTTCAACT CAGGCGTCCG ATGCTGCAGC TTCAGGGTCC
GGGCTTGACC CCAGCCAATG CTTTGCATTT CCGCTGGATG ACTTTCAGTT AGAAGCCATC
GATGCGCTCA ACCAAGGGCA CTCAGTTGTG GTGAGTGCCC CCACTGGATC GGGCAAAACC
TTAGTGGGTG AATACGCCAT TTATCGAGCC CTCGCCCATG GCCAGAAAGT TTTTTATACG
ACTCCCCTTA AGGCACTCTC CAATCAGAAA CTTCGTGATT TTCGAGAACA GTTTGGCGAC
GAGAACGTTG GTCTGTTGAC CGGTGATTTG AGTGTGAATC GGGAGGCCTC AATCGTGGTG
ATGACCACGG AGATCTTTCG GAACATGCTC TATGCCGAGG CTGATGAGCA TGACGATCCA
CTCGCTGATG TGGAAGCTGT GGTGCTTGAT GAATGCCACT ACATGAATGA TTCCCAGCGA
GGCACCGTTT GGGAGGAATC AATCATTCAT TGCCCGCCTC CCATTCAACT TGTTGCCTTG
TCGGCCACCG TGGCCAATGC GGGCCAACTC ACCGATTGGA TTGAAAAGGT GCATGGGCCC
ACAACGCTGA TCGTCAGCGA CCACCGCCCT GTGCCTCTGC AATTCAGCTT TTGTAGTGCC
AAAGGATTGC ATCCTCTGTT GAATGAGGCC GGCACCGGAT TGCACCCCAA CTGCAAAGTG
TGGCGGGCTC CGAAGGGACA AAAGCGCAAA GGGCGCTCCA ACAAGCCACC TCAGCCTGAA
GCTCCCCCGA TCAGTTTCGT TGTGGCGCAG ATGGCGCAAC GAGACATGTT GCCGGCGATC
TACTTCATTT TTAGCCGCCG TAATTGCGAC AAATCGGTTC GGGATTTGGG TGCTCAATGC
CTTGTCACCC AAGACGAACA GGCACGCATC CAGGCTCGGT TTGCGGCCTA CAGCGCAGCC
AACCCAGAGG CTGTGAGGGA TGGCATCCAT GCCGATGCCC TGATGCGAGG GATTGCCGCA
CACCATGCGG GCGTGTTGCC CGCTTGGAAG GAGCTCATTG AGGAACTGTT TCAGCAGGGG
TTAGTGAAAG TGGTGTTCGC CACAGAAACC CTTGCTGCGG GGATCAACAT GCCGGCTCGG
AGCACCGTGA TTGCCTCGTT GTCGAAGCGA ACGGAACGGG GCCATCGTCC GCTAATGGGG
AGCGAGTTCC TGCAGATGGC TGGTCGCGCT GGTCGGCGCG GCTTGGATTC GCAGGGGTAT
GTCGTCACGG TCCAAAGCCG GTTTGAGGGG GTTCGGGAAG CGGGTCAGCT GGCCACCAGT
CCGGCTGACC CCTTGGTGAG TCAGTTCACC CCCAGTTACG GAATGGTCCT CAATCTTCTT
CAGCGTCACA GCCTTGAGAA GGCCAGGGAG TTGGTGCAAC GCAGCTTCGG TCGCTATCTC
GCAGGTTTAG ACCTGGTTGA TGACGAAGAG ATGCTCTCCC AGCTGCGGCT TCAGCTCAGC
CAGCTGGATG GAGTTGCCGG TGATGTTCCT TGGGAAGATT TTGAGGACTA TGAAAAGGAG
CGTGGCCGGC TGCGGGAAGA GCGCCGTTTG CTGAGGATTC TCCAGCAACA AGCTGAAGAG
ACTCTCGCCA ACGAGCTCAC TCAGGCGTTG CAATTCGCCA GCAACGGCGC CTTGGTGAGT
TTGAAGTCAG CCCAGCTTCG CGGACGGGTT ACCCCAGCAG TGATTGTTGA AAAGGTGAAT
GGGCCTGGCC AATTTCCCCG ACTGCTCTGT CTCACGGACG ACAACGTATG GATTTTGTTG
CCCTGTCAGG GCGTCGTCAG TCTTCACGCT GAACTGAGCT GCCTTCAGGT GGATGGGGTG
GTTCCTCCGA TGTTGCAGCG GTCTGGGGAG ATCCGCCATG GGGATCAAGC CAGTGGGCAG
CTCGCTTTGG CTGTGTCCCA TATGGCGAAA CGCCACGACA TGACGACCCC GCAATACGAC
CTGGCGGGTG AGGTACTCAC CCAGGCTCGT TTGGTGCAGC AGTTGGAGTT GGACCTCGAG
CAGCATCCAG CCCACCGTTG GGGTGACCGC AAGCAACTCA AAAAACACCG TCGTCGCATG
GAGGAGCTGG AGCACGAAAT CGCTGAGCGG CAGCGGTTGC TTCATCACCG TTCCAATCGT
CACTGGGACA TGTTTTTGGC GTTGAAGGAC ATCCTTCAAC AATTTGGCTG CCTGGATGAT
CTCGATCCCA CGGAAGTTGG ACGCACCGTG GCGGCCTTGC GTGGAGACAA CGAGCTATGG
CTTGGCCTTG CTCTGATGAG TGGACATTTG GATGAGCTTG ATCCGCCCAA TCTGGCTGCC
GTGTTCGAGG CGATTAGCAC CGAGGTGAAT CGACCGGATC TTTGGAGTGG CTTCCCCCCC
TCTGGCCCCG CGGAAGAGGC GTTGCAGGAT TTATCCGGGT TGCGTCGGGA GTTGCTCCGC
GCGCAAGAGC GGGCCAGTGT TGTGGTGCCG GCCTGGTGGG AGCCTGAGTT GATGGGCCTT
GTCGAGGCCT GGGCGAAGGG AACTTCTTGG GTCGATTTGA TCGCTAACAC GTCCTTGGAT
GAAGGAGACG TGGTTCGCAT TATGCGGAGA ACGGTCGATC TTCTCGCCCA GGTTCCCTAC
TGCGAAGCGA TTAGTGAGCA GTTGCGGAGC CATGCCAAGC AAGCGCTGAA GGCAATCAAT
CGTTTCCCCG TGGCTGAACT GGAGGATCCT CGCGCTGCAG TGTCTGGAGG ACTGAATCCC
GCGACGGAGC GGGCGGCCTG A
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| Protein sequence | MTKAQPEPST QASDAAASGS GLDPSQCFAF PLDDFQLEAI DALNQGHSVV VSAPTGSGKT
LVGEYAIYRA LAHGQKVFYT TPLKALSNQK LRDFREQFGD ENVGLLTGDL SVNREASIVV
MTTEIFRNML YAEADEHDDP LADVEAVVLD ECHYMNDSQR GTVWEESIIH CPPPIQLVAL
SATVANAGQL TDWIEKVHGP TTLIVSDHRP VPLQFSFCSA KGLHPLLNEA GTGLHPNCKV
WRAPKGQKRK GRSNKPPQPE APPISFVVAQ MAQRDMLPAI YFIFSRRNCD KSVRDLGAQC
LVTQDEQARI QARFAAYSAA NPEAVRDGIH ADALMRGIAA HHAGVLPAWK ELIEELFQQG
LVKVVFATET LAAGINMPAR STVIASLSKR TERGHRPLMG SEFLQMAGRA GRRGLDSQGY
VVTVQSRFEG VREAGQLATS PADPLVSQFT PSYGMVLNLL QRHSLEKARE LVQRSFGRYL
AGLDLVDDEE MLSQLRLQLS QLDGVAGDVP WEDFEDYEKE RGRLREERRL LRILQQQAEE
TLANELTQAL QFASNGALVS LKSAQLRGRV TPAVIVEKVN GPGQFPRLLC LTDDNVWILL
PCQGVVSLHA ELSCLQVDGV VPPMLQRSGE IRHGDQASGQ LALAVSHMAK RHDMTTPQYD
LAGEVLTQAR LVQQLELDLE QHPAHRWGDR KQLKKHRRRM EELEHEIAER QRLLHHRSNR
HWDMFLALKD ILQQFGCLDD LDPTEVGRTV AALRGDNELW LGLALMSGHL DELDPPNLAA
VFEAISTEVN RPDLWSGFPP SGPAEEALQD LSGLRRELLR AQERASVVVP AWWEPELMGL
VEAWAKGTSW VDLIANTSLD EGDVVRIMRR TVDLLAQVPY CEAISEQLRS HAKQALKAIN
RFPVAELEDP RAAVSGGLNP ATERAA
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