| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0618 |
|---|
| Symbol | |
|---|
| ID | 3742621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 627266 |
|---|
| End bp | 627808 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637770789 |
|---|
| Product | heat shock protein DnaJ-like |
|---|
| Protein accession | YP_376630 |
|---|
| Protein GI | 78184195 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACC AGATCAAGTC TGTGCCGGAC GTCTCCATCA GCCACTACCA ACGGCTCGGT
GTGGCCCCAG GAGTCGATCC GGAAGCATTG CGCCAGGCAT TCCGGCGCAA GAGCAAAGCA
TTGCATCCCG ACACTACGGC GCTGCCTGAA GCTCAGGCCA GCCTTGCGTT CCAACAACTC
AAGGAGTCCT ACGCCCTCCT GGCGGACCCT GGGCGTCGCG ATGCCTATGA CGCCATGCTC
CGCGAAACTA CTGCGAGGCC TCACGTCGTC CAGAAGTCCA CCTCTGACCC TTGGAACGGG
ATTGGTGAGC GGCGTCCGCT GTCAGGAGGT GAATGGTTTT CCTTGGTTCT ACTGAGCTTG
GCTCTCCTTC TCAGCTTGCT GTTGGGATTG GGAGTGGCGG TTGTGCAAGG CCGGGATTGG
CAAGTGTCGC CGTCCTGGCT CACCGATGAG CAGACTTTGA GAACCTCCAA TGTGCGATCC
GATGTCGTCC TCCCTCCCAC CGGAGAGTTC ACCACTGAAT CAGCACTCCC TCCGAGCGCT
TGA
|
|---|
| Protein sequence | MKDQIKSVPD VSISHYQRLG VAPGVDPEAL RQAFRRKSKA LHPDTTALPE AQASLAFQQL
KESYALLADP GRRDAYDAML RETTARPHVV QKSTSDPWNG IGERRPLSGG EWFSLVLLSL
ALLLSLLLGL GVAVVQGRDW QVSPSWLTDE QTLRTSNVRS DVVLPPTGEF TTESALPPSA
|
|---|
| |