Gene Syncc9902_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0616 
Symbol 
ID3742658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp625298 
End bp626500 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content56% 
IMG OID637770787 
Producthypothetical protein 
Protein accessionYP_376628 
Protein GI78184193 
COG category[R] General function prediction only 
COG ID[COG1453] Predicted oxidoreductases of the aldo/keto reductase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCGC TTCCAACGCG ACGCTTTGGG CGGACAGAGC TGGATATTCC CCTGTTATCG 
CTTGGGGCCA TGCGGTTCCA GCAGAGTTGG AGCGATCTTC CGGCAGAGGA GATCTCAGAA
ACATCGCAAT CGCAGTTGCA AGCCACATTG AATCGGGCTG TCGCTGAAGG ATTTCATCAT
GTAGAGACGG CTCGGCACTA CGGCACCTCG GAACGACAGT TGGGTTGGGC CTTGCCCAAA
GCACCCGATG CCAAGCGTTT GCTGCAAAGC AAAGTTCCTC CCCGTGACGA TGTCGTTGCC
TTTGAAGCGG AGCTGGAGCT GAGCTTTGAA CGCCTGGACT GTGACCGCTT GGACCTTCTG
GCCATTCACG GAATCAACTT GCCGGAACAT CTTGAGCAAA CGCTTCGTCC TGGCGGTTGC
ATGGAGGTGG TCCGTCGCTG GCAAGCAGAG GGCCGGATTG GTTCGGTGGG CTTTTCAACC
CATGGACCCA CCGAGTTGAT TGTGGATGCG TGTAACACCG GTGCTTTCGA CTACATCAAT
CTGCATTGGT ATTACATCCG TCAGGACAAT GGCCCCGCTT TGGATGCGGC CCGTCGTCAA
GACATGGGTG TTTTCATCAT TAGTCCTACG GATAAAGGGG GCCACCTCCA CAGCCCATCC
CAGAAATTGT TGGACCTTTG CGCGCCACTG CACCCGATTG TGTTTAACGA TCTGTTTTGT
CTTCAGGATG AACGCGTGCA TACCATCAGC GTTGGTGCCG CTTCACCGCA GGACTTTGAT
CGCCATCTCA AGGCGATTGA GCTCTTGCCT CAAGCCGTTG ATCTGATTGA ACCGGTGCAT
CAACGCCTGG AGAGGGCGGC TGTGGATGCG CTAGGTCCGG AATGGATGGC CACATGGCAT
GTGGGGCTTC CCTCTTGGCA AGACACTCCT GGAGAGATCA ACTTGCCCGT TTTGCTTTGG
CTCCACAATT TGCTGGAGGC TTGGGACCTT CAAAGCTTTG CAACGGCGCG GTATCGACTG
CTTGGCCAAG GGGGGCATTG GTTTGCTGGA TCCAATGCCG ATTCCTTTGA TGATCAGGTC
AGTGCGTCGG CCCTTCAGGC GGTGCTCGGG GCTAGTCCTT GGCGAACCAG GATTCCAATG
ATCTTGGCGC AGCTCAAACA GCGGTTGGCG GGCGACTCTC AAAAGCGGCT CACCAGTCTT
TGA
 
Protein sequence
MASLPTRRFG RTELDIPLLS LGAMRFQQSW SDLPAEEISE TSQSQLQATL NRAVAEGFHH 
VETARHYGTS ERQLGWALPK APDAKRLLQS KVPPRDDVVA FEAELELSFE RLDCDRLDLL
AIHGINLPEH LEQTLRPGGC MEVVRRWQAE GRIGSVGFST HGPTELIVDA CNTGAFDYIN
LHWYYIRQDN GPALDAARRQ DMGVFIISPT DKGGHLHSPS QKLLDLCAPL HPIVFNDLFC
LQDERVHTIS VGAASPQDFD RHLKAIELLP QAVDLIEPVH QRLERAAVDA LGPEWMATWH
VGLPSWQDTP GEINLPVLLW LHNLLEAWDL QSFATARYRL LGQGGHWFAG SNADSFDDQV
SASALQAVLG ASPWRTRIPM ILAQLKQRLA GDSQKRLTSL