| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0606 |
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| Symbol | |
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| ID | 3742648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 614027 |
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| End bp | 615931 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637770777 |
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| Product | DNA-directed RNA polymerase subunit gamma |
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| Protein accession | YP_376618 |
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| Protein GI | 78184183 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02387] DNA-directed RNA polymerase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACA GCAACCTCCG TACCGAAAAT CACTTCGATT ACGTCAAGAT CACACTTGCA
TCGCCCGAGC GGGTGATGGA GTGGGGTCAG CGCACCCTTC CTAATGGACA GGTGGTTGGC
GAAGTCACCA AACCGGAAAC CATCAATTAC CGGACGTTGA AGCCCGAGAT GGACGGGCTT
TTTTGCGAGA AGATTTTTGG CCCTTCTAAG GACTGGGAAT GCCACTGCGG TAAGTACAAA
CGTGTGCGTC ACCGCGGCAT TGTTTGTGAA CGTTGTGGTG TTGAGGTCAC GGAGAGCAGG
GTTCGCCGTC ATCGGATGGG CTTCATCAAG CTCGCCGCTC CGGTATCCCA TGTTTGGTAC
CTCAAGGGGA TCCCGAGCTA TGTGGCCATT CTTTTGGATA TGCCGCTCCG CGATGTTGAG
CAGATTGTTT ACTTCAACTG CTATGTCGTT CTTGATCCAG GTGATCACAA GGATCTGAAG
TACAAGCAGC TGCTGACGGA AGATGAATGG CTGGAAATCG AAGATGAGAT TTATGCAGAA
GAGTCTGAAA TTGAGAATGA ACCGGTTGTT GGCATTGGTG CCGAAGCCCT GAAGCAACTT
CTTGAGGATC TCAGCCTTGA AGAAGTCGCG CAGCAGCTAC GTGAAGACAT CAATGGCAGT
AAGGGCCAAA AACGCGCCAA GCTGATCAAA CGTCTTCGCG TGATCGATAA CTTCATCGCG
ACGGGTGCTC GCCCCGATTG GATGGTGCTT GACGTTATCC CAGTGATTCC ACCGGATCTC
CGTCCGATGG TTCAGCTGGA TGGTGGACGT TTTGCTACGT CCGATCTCAA TGATCTTTAC
CGCCGCGTGA TCAATCGGAA CAACCGCTTG GCTCGGTTGC AAGAAATCCT GGCGCCCGAG
ATCATTGTCC GCAATGAGAA GCGGATGCTT CAAGAAGCCG TTGATGCATT GATCGATAAC
GGTCGTCGAG GTCGCACGGT TGTTGGTGCG AATAATCGGC CGCTGAAATC ACTAAGCGAC
ATTATTGAAG GTAAGCAGGG ACGTTTCCGT CAGAACCTTC TCGGCAAGCG TGTTGATTAT
TCAGGCCGCT CCGTGATCGT GGTGGGTCCA AAACTGAAAA TGCATCAGTG TGGATTGCCA
AAGGAAATGG CGATTGAGTT GTTCCAGCCA TTTGTGATTC ACCGTCTGAT TCGTCAGAAC
ATCGTTAACA ACATCAAGGC GGCCAAGAAA CTCATTCAGC GTGCCGATGA TGAAGTGATG
CAGGTTCTGC AAGAGGTGAT TGATGGTCAC CCAATCATGT TGAACCGGGC TCCAACCCTG
CACCGATTGG GCATTCAGGC CTTTGAACCC AAGTTGGTTG ATGGTCGTGC AATCCAACTC
CATCCTCTGG TTTGTCCGGC GTTTAACGCC GACTTTGACG GCGACCAAAT GGCCGTCCAT
GTTCCGCTTG CGATCGAGGC TCAGACCGAG GCCCGCATGT TGATGTTGGC TAGCAACAAC
ATCCTCTCTC CTGCAACAGG GGAGCCGATC ATCACTCCAT CGCAGGACAT GGTGTTGGGG
TCTTATTACC TAACCGCCTT GCAGCCCGAT GCAACCCAAC CCGAATTCGG CGATCGCAGT
GCAACGTTTG CAGGCCTTGA CGATGTCATT CATGCCTTCG ACGACACCCG CATTGGCCTC
CACGATTGGG TCTGGGTTCG TTTCAACGGA GAAGTTGAAG ATGATGATGA ACTGCAGGAA
CCACTGAAGT CGGAAACCTT GAGTGATGGA ACACGGATTG AACAGTGGAC TTACCGACGC
GATCGCTTCG ACGAAGAGGG AGCGCTGATA AGCCGTTACG TCCTCACCAC TGTTGGCCGG
GTGGTTATGA ATCACACCAT CATTGATGCG GTGGCCTCAG CCTGA
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| Protein sequence | MTNSNLRTEN HFDYVKITLA SPERVMEWGQ RTLPNGQVVG EVTKPETINY RTLKPEMDGL
FCEKIFGPSK DWECHCGKYK RVRHRGIVCE RCGVEVTESR VRRHRMGFIK LAAPVSHVWY
LKGIPSYVAI LLDMPLRDVE QIVYFNCYVV LDPGDHKDLK YKQLLTEDEW LEIEDEIYAE
ESEIENEPVV GIGAEALKQL LEDLSLEEVA QQLREDINGS KGQKRAKLIK RLRVIDNFIA
TGARPDWMVL DVIPVIPPDL RPMVQLDGGR FATSDLNDLY RRVINRNNRL ARLQEILAPE
IIVRNEKRML QEAVDALIDN GRRGRTVVGA NNRPLKSLSD IIEGKQGRFR QNLLGKRVDY
SGRSVIVVGP KLKMHQCGLP KEMAIELFQP FVIHRLIRQN IVNNIKAAKK LIQRADDEVM
QVLQEVIDGH PIMLNRAPTL HRLGIQAFEP KLVDGRAIQL HPLVCPAFNA DFDGDQMAVH
VPLAIEAQTE ARMLMLASNN ILSPATGEPI ITPSQDMVLG SYYLTALQPD ATQPEFGDRS
ATFAGLDDVI HAFDDTRIGL HDWVWVRFNG EVEDDDELQE PLKSETLSDG TRIEQWTYRR
DRFDEEGALI SRYVLTTVGR VVMNHTIIDA VASA
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