Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0600 |
Symbol | |
ID | 3742642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 606000 |
End bp | 607061 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637770771 |
Product | PDZ/DHR/GLGF |
Protein accession | YP_376612 |
Protein GI | 78184177 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGACA CATTTTTGTT GTCGGCATCC CCGGTTCAAG CTGTTGAGCA CAGCTTTGTG GCGAAATCGG TGCGTCGTGT CGCCCCTGCT GTGGTTCGGA TCGACACCGA ACGCACCGTG GAGCGGCAAG CCTTTGATCC CACGTTGATC GATCCGCTTT TGCGTGATTT GTTGGGGGAT CCGCAGTTAG GACCCGAGCG AGAGCGGGGG CAAGGATCAG GGGTTGTCAT TGACTCCAAA GGACTGGTGC TCACCAATGC CCACGTTGTC GATCGTGTGG AATCAGTCAG CGTCACCGTG GCGGATGGTG AGCAGCTTGA TGGCCATGTG GTGGGCTTCG ACCCCGTTAC CGATATCGCT TTGGTTCAGC TTGAGGGGCG GAACTTACCT CCGAAAGCAC CCTTAGGTGA TTCAGAAGTG ATGGAAGTTG GCGATTGGGC GATCGCGCTC GGCACTCCCT TTGGCCTGGA GCGCACCGTC ACACTCGGCA TCGTCAGCAG TCTTCACCGC AATATCAACA GTCTTGGTTT TTCGGACAAA CGCCTTGATC TGATTCAAAC GGACGCGGCG ATCAATCCAG GGAATTCCGG AGGGCCTCTG GTGAACGGAG AGGGAGAAGT GATCGGGATT AATACCCTTG TGCGTTCTGG CCCAGGGGCG GGTCTGGGCT TTGCCATCCC GATCAATTTG GCGAGACGCG TGGCTGATCA ATTGCAGGAG CAGGGTGAAG TTGTGCACCC CTACATCGGA TTGCAGTTGG TTGGGTTGAC GCCTCGGATT GCCAGGGACC ACAACAAAGA TCCCAATGCA TTGGTGCAAC TGCCAGAGCG CACAGGAGCG CTGGTACAAA GCGTTTTGCC TCAGGGCCCT GCCGAAGAGG CTGGGTTGCG TCGTGGTGAC CTGGTGATTG CGGTGGATGA AAAGCCTGTT GCTGATCCGC AGGCTTTGCT CGAGGTGGTG GATGCTGCTC GGCTTTCTGA GCCCCTGCCC TTAACGGTGT TGCGCAACGG CCGTGAGCTC ACTCTGTCGG TCAAACCGGC TCCCTTACCA GGCTTGGGCT GA
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Protein sequence | MLDTFLLSAS PVQAVEHSFV AKSVRRVAPA VVRIDTERTV ERQAFDPTLI DPLLRDLLGD PQLGPERERG QGSGVVIDSK GLVLTNAHVV DRVESVSVTV ADGEQLDGHV VGFDPVTDIA LVQLEGRNLP PKAPLGDSEV MEVGDWAIAL GTPFGLERTV TLGIVSSLHR NINSLGFSDK RLDLIQTDAA INPGNSGGPL VNGEGEVIGI NTLVRSGPGA GLGFAIPINL ARRVADQLQE QGEVVHPYIG LQLVGLTPRI ARDHNKDPNA LVQLPERTGA LVQSVLPQGP AEEAGLRRGD LVIAVDEKPV ADPQALLEVV DAARLSEPLP LTVLRNGREL TLSVKPAPLP GLG
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