Gene Syncc9902_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0600 
Symbol 
ID3742642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp606000 
End bp607061 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content58% 
IMG OID637770771 
ProductPDZ/DHR/GLGF 
Protein accessionYP_376612 
Protein GI78184177 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGACA CATTTTTGTT GTCGGCATCC CCGGTTCAAG CTGTTGAGCA CAGCTTTGTG 
GCGAAATCGG TGCGTCGTGT CGCCCCTGCT GTGGTTCGGA TCGACACCGA ACGCACCGTG
GAGCGGCAAG CCTTTGATCC CACGTTGATC GATCCGCTTT TGCGTGATTT GTTGGGGGAT
CCGCAGTTAG GACCCGAGCG AGAGCGGGGG CAAGGATCAG GGGTTGTCAT TGACTCCAAA
GGACTGGTGC TCACCAATGC CCACGTTGTC GATCGTGTGG AATCAGTCAG CGTCACCGTG
GCGGATGGTG AGCAGCTTGA TGGCCATGTG GTGGGCTTCG ACCCCGTTAC CGATATCGCT
TTGGTTCAGC TTGAGGGGCG GAACTTACCT CCGAAAGCAC CCTTAGGTGA TTCAGAAGTG
ATGGAAGTTG GCGATTGGGC GATCGCGCTC GGCACTCCCT TTGGCCTGGA GCGCACCGTC
ACACTCGGCA TCGTCAGCAG TCTTCACCGC AATATCAACA GTCTTGGTTT TTCGGACAAA
CGCCTTGATC TGATTCAAAC GGACGCGGCG ATCAATCCAG GGAATTCCGG AGGGCCTCTG
GTGAACGGAG AGGGAGAAGT GATCGGGATT AATACCCTTG TGCGTTCTGG CCCAGGGGCG
GGTCTGGGCT TTGCCATCCC GATCAATTTG GCGAGACGCG TGGCTGATCA ATTGCAGGAG
CAGGGTGAAG TTGTGCACCC CTACATCGGA TTGCAGTTGG TTGGGTTGAC GCCTCGGATT
GCCAGGGACC ACAACAAAGA TCCCAATGCA TTGGTGCAAC TGCCAGAGCG CACAGGAGCG
CTGGTACAAA GCGTTTTGCC TCAGGGCCCT GCCGAAGAGG CTGGGTTGCG TCGTGGTGAC
CTGGTGATTG CGGTGGATGA AAAGCCTGTT GCTGATCCGC AGGCTTTGCT CGAGGTGGTG
GATGCTGCTC GGCTTTCTGA GCCCCTGCCC TTAACGGTGT TGCGCAACGG CCGTGAGCTC
ACTCTGTCGG TCAAACCGGC TCCCTTACCA GGCTTGGGCT GA
 
Protein sequence
MLDTFLLSAS PVQAVEHSFV AKSVRRVAPA VVRIDTERTV ERQAFDPTLI DPLLRDLLGD 
PQLGPERERG QGSGVVIDSK GLVLTNAHVV DRVESVSVTV ADGEQLDGHV VGFDPVTDIA
LVQLEGRNLP PKAPLGDSEV MEVGDWAIAL GTPFGLERTV TLGIVSSLHR NINSLGFSDK
RLDLIQTDAA INPGNSGGPL VNGEGEVIGI NTLVRSGPGA GLGFAIPINL ARRVADQLQE
QGEVVHPYIG LQLVGLTPRI ARDHNKDPNA LVQLPERTGA LVQSVLPQGP AEEAGLRRGD
LVIAVDEKPV ADPQALLEVV DAARLSEPLP LTVLRNGREL TLSVKPAPLP GLG