| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0585 |
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| Symbol | sdhA |
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| ID | 3743368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 589206 |
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| End bp | 591122 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637770756 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_376597 |
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| Protein GI | 78184162 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.755326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGCT TACCCGATCC ACGCCTGCCC TCAGGCCCGC TAGCGGACGC CTGGCGTCGC
ACCCGCGAAA CGAGTCCACT GATCAGTCCA CTGCGCAAAA GCCAAATCGA CATCCTTGTC
GTTGGCACTG GTCTTGCGGG AGCCTCAACC GCTGCAACTC TGGCCCAACA GGGTTACCGG
GTGACGGTGC TGAGCTTCCA TGACAGCCCA CGGCGCGCCC ATTCGGTGGC AGCTCAAGGG
GGCATTAATG CCGCCCGTGC CGTGGCGGTC GATGGCGACA GCATCAGTCG ACTGTTCAGC
GACACGCTGA AAGGGGGCGA CTTCCGAGCC CGCGAAGCCG GTTGTCAGCG GCTGGCCGAA
ATCAGCAGCG GCATCATTGA TCAGTGTGTC GCCCAAGGGG TTCCATTCGC TCGGGAATAC
GGCGGAAGCT TGGCCACCCG AAGTTTTGGG GGTGCATTGG TGAGCCGCAC CTTTTATGCC
CGCGGACAGA CGGGGCAACA GTTGCTGTAT GGGGCCTATC AAGCCTTGAT GCGCCAGGTG
GAACTTGGAC GCGTGCGCTT GCTCACACGC CGCGACGTTC TGGAGCTGAT CACCATCGAT
GGCATGGCCC GCGGCGTGGT GGCCCGACAC CTACTGACCG GTGAGCTTGA GGTGCATACC
GCCCGGACCG TCCTGCTCTG CAGTGGTGGC TATAGCAACG TGTACTTCCT CTCAACCAAT
GCGTTGAAAT CCAACGCCAG CGCCATTTGG CGTGCCCATC GAAAGGGCGC CCTCTTCGCC
AACCCCTGCT TCACCCAGAT CCATCCGACG TGCATTCCGA GCGGTGATGC CTTCCAAAGC
AAGCTGACGC TCATGAGCGA AAGTCTTCGC AATGACGGGC GGATCTGGTT GCCCAAACGG
GCTGGGGATC AGCGTCCAGC CAATGAGATT CCGGAAGAGG AAAGGGATTA TTTCCTCGAG
CGGATGTATC CCACCTACGG AAACATGACG CCTCGCGATG TTGCGTCCCG GCGGGCCCGG
GAACTCTGCA ATGCAGGCCG CGGTGTGGGC CCTGGGGGAC GGTCGGTGTA CCTCGATCTC
AACGACGCCA TTGCGAATGA GGGACGCGAC ACCATCGCCG CGCGATACGG CAATTTAATG
ACGATGTATG AGCGCATCAG CGGCGACGAT CCGTATCAGA AACCGATGCG GATTTACCCA
GCTCCGCACT ACACGATGGG AGGACTATGG GTGGATTATC AACTGATGAG TTCGATTCCG
GGATTGTTTG TTCTGGGCGA GGCCAACTAC TCCGAACATG GTGCGAATCG CCTGGGGGCA
AGTGCCTTAA TGCAGGGACT GGCCGATGGA TATTTCATTG CGCCATCGAC AGTAACGAGC
TGGCTCGCAG GGCATGCAGG GGAACAGATT CAAGACGATC ATCCAGCTTG TCGAGAAGCC
CTCGACTGCA CCCAATCCCG CATCGACAAC CTGCTCAACA GCCAAGGCAA CACTCCAGTG
GACAGCTTCC ATCGAGACCT TGGCGCCATC ATGATCAATC ACTGCGGCAT CAGTCGTCAT
GAGAAGGGCT TAAAGCAGGG TCTTCAAGCT GTGGCAGCCC TCTCCGAACG CTTCCAACAC
GAGGTGCGCG TACCAGGCGA AGCCCATGGA CCAAATGCCG AACTCGAAAA AGCACTACGG
GTGAGTGACT TCTTCGGACT TGCAGACCTG ATGCTGCGCG ATGCGTTGGC TCGAGAGGAA
TCCTGCGGCG CCCATTTCCG CGAAGAGCAT CAAAGTGCAG AAGGCGAAGC GTTGCGAGAC
GACGCCAACT TTGCCCATAT CGCAGCGTGG GAGCACAACG CCAATGGCAC ACCGATCCGT
CATACAGAAG CATTGCAGTT CACCACCTTG AAACCCAGCA CCCGCAGCTA CAAATGA
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| Protein sequence | MSGLPDPRLP SGPLADAWRR TRETSPLISP LRKSQIDILV VGTGLAGAST AATLAQQGYR
VTVLSFHDSP RRAHSVAAQG GINAARAVAV DGDSISRLFS DTLKGGDFRA REAGCQRLAE
ISSGIIDQCV AQGVPFAREY GGSLATRSFG GALVSRTFYA RGQTGQQLLY GAYQALMRQV
ELGRVRLLTR RDVLELITID GMARGVVARH LLTGELEVHT ARTVLLCSGG YSNVYFLSTN
ALKSNASAIW RAHRKGALFA NPCFTQIHPT CIPSGDAFQS KLTLMSESLR NDGRIWLPKR
AGDQRPANEI PEEERDYFLE RMYPTYGNMT PRDVASRRAR ELCNAGRGVG PGGRSVYLDL
NDAIANEGRD TIAARYGNLM TMYERISGDD PYQKPMRIYP APHYTMGGLW VDYQLMSSIP
GLFVLGEANY SEHGANRLGA SALMQGLADG YFIAPSTVTS WLAGHAGEQI QDDHPACREA
LDCTQSRIDN LLNSQGNTPV DSFHRDLGAI MINHCGISRH EKGLKQGLQA VAALSERFQH
EVRVPGEAHG PNAELEKALR VSDFFGLADL MLRDALAREE SCGAHFREEH QSAEGEALRD
DANFAHIAAW EHNANGTPIR HTEALQFTTL KPSTRSYK
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