| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0577 |
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| Symbol | |
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| ID | 3742904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 582384 |
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| End bp | 584462 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637770748 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_376589 |
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| Protein GI | 78184154 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGGCA TTCATTCCGG CAAGCCCTGG CCCTTGGGCA GCAGTACAAC AACGCGAGGA
GTGAATTTCT CCTTGGCAGC CCCTGCTGCG GATCGGATCG AGCTGTTGCT GTATCGCAAC
GGCAGTGATG GGGCCCCTGA ACGGGTGATC GAGCTTGATG CTCGACGGCA TCGTTCAGGG
GATTACTGGC ATGTCGAAGT GGAGGGACTC AACGAGGGCT GCTGTTACGG CTACCGAGTG
TTTGGCCCCC TAGCACCGGG AGGCCATGGT TTTCGCCCCT CAAAAGTGTT GTTGGATCCA
GCAGCACGAG CGATTACTGG TTGGGATGTC TACGACCGAG TCCTCGCCAC GGGACCCTCG
CCCAATGCCC ATGCTTGCCT CAAGGCCGTG GTGAGTGAGC GGAAGCCGTT CGACTTCGAA
TCCCACCCGC GCCCCCGTCA CAGCTGGCAA CGTTCGGTGA TTTATGAATT GCATGTGGGT
GCCTTCACCC GGGCGAGCGA TTCAGGTTTG GACCGATCAG ACCGAGGCTG CTATCGCGGA
GTGATTGAGA AGCTCCCTTA CTTAAAAGAT CTCGGAGTAA CGGCGATTGA GCTCCTACCG
GTGTTCATTT TTGACCCTGC CGATGCACCT CCAGGTCGGG ACAATGTTTG GGGATACAGC
CCACTCAATT GGTTCACACC CCACCACGGC TACTGCTCAG TAGACGATCC TTTGCAAGGA
CGCGATGAGA TGCGTCAATT GGTCGCCGCC TGCCATGACG CGGGTATTGA AGTGCTGCTG
GACGTTGTGT ACAACCACAC AACTGAGGGA AATCGCCACG GTCCAACGCT GAGTTGGCGT
GGGTTTGCTG ACGACACCTA TTACCACCAG AACAGCGACG GCGACTACCT CGACGTGAGC
GGCTGCGGCA ATTCAATCGC TGCCAACGAT CCGATCAGCA CACAGCTGAT CTTGGAATCC
ATGCGCTGCT GGGCTCTTGA ACTTGGCATT GATGGCTTTC GTTTCGACCT TGGGATTGCG
CTCAGCCGGG GCGCACAACT GAAGCCCCTT GACCACCCCC CTCTATTCAC GGCGATGGAA
GCGGACCCCG AGCTCAGCGA CCTCAAACTG GTGAGCGAGC CTTGGGATTG TGGTGGCTTG
TACCGGCTGA ATGACTTTCC AGCGAAGCGA GTCGGCACGT GGAACGGTCA TTTCCGTGAT
GGATTGCGCC GGTTCTGGAA AGGTGATGAG CACACCACAT GGGCCCTGGC ACAACGTTTT
AAAGGCAGTC CAGACCTCTA CGACGGGAAG GCTGTCGCCA TGGGTCGCTC CGTGAACCTC
ATCACAGCCC ACGATGGCTT CACGCTTGCC GACCTGGTGA GTTACAACCG CAAGCACAAC
CTCGCCAATG GCGAAGACAA CCGCGACGGC GAAAACCACA ACAACAGCTG GAACCACGGC
ATAGAAGGAC CCACCACCGA TCCAGCGGTG TTGGCATTAC GACGACGACA GCAACGCAAT
CTGCTGAGCA CCCTGTTGCT CGCCCGTGGG GTACCGATGC TGCTGATGGG CGATGAAGTG
GGACGAAGCC AGGGGGGGAA CAACAACACC TGGTGCCAAG ACAGTCCATT GGGCTGGATG
GTTTGGAACG AAGACCACTG CGATTTGGAG CTCAAGCTTT TTCTCACACG CCTGTTGAAG
TTGCGTCAGG CCCTACCGCA GCTGTTCAAC CCCTTGATTC CAGCGCGGGA AACCACGAAG
AAACATCCGC AGGATCAAAC TGATCTGTGG CGTCAGTGGC ATGGCGTGGA ACTCTCAAAG
CCGGATTGGG CGGCATGGTC TCGCTCCATT GCCACAAGCT TGCATATGGG AAGCCACGGT
GCCCTGATCT GGATGGGCTT CAACGCCCAT AAAGAAGCTT TGAATTTCGA ACTTCCTGTT
CCAGCTTCGC CGTGGACGCG GGTGATCGAT ACGTCTCTGC CATCTCCAAA GGATCTGCCG
GAGCAACCCG TCCCATTCCG AGGGGTCACC ATCCCCATGC AAAGCCGAAG TTTTGTGCTG
CTCGTGGCTC AAGACGAAGT CTCAAACCTG CGGCTTTAA
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| Protein sequence | MSGIHSGKPW PLGSSTTTRG VNFSLAAPAA DRIELLLYRN GSDGAPERVI ELDARRHRSG
DYWHVEVEGL NEGCCYGYRV FGPLAPGGHG FRPSKVLLDP AARAITGWDV YDRVLATGPS
PNAHACLKAV VSERKPFDFE SHPRPRHSWQ RSVIYELHVG AFTRASDSGL DRSDRGCYRG
VIEKLPYLKD LGVTAIELLP VFIFDPADAP PGRDNVWGYS PLNWFTPHHG YCSVDDPLQG
RDEMRQLVAA CHDAGIEVLL DVVYNHTTEG NRHGPTLSWR GFADDTYYHQ NSDGDYLDVS
GCGNSIAAND PISTQLILES MRCWALELGI DGFRFDLGIA LSRGAQLKPL DHPPLFTAME
ADPELSDLKL VSEPWDCGGL YRLNDFPAKR VGTWNGHFRD GLRRFWKGDE HTTWALAQRF
KGSPDLYDGK AVAMGRSVNL ITAHDGFTLA DLVSYNRKHN LANGEDNRDG ENHNNSWNHG
IEGPTTDPAV LALRRRQQRN LLSTLLLARG VPMLLMGDEV GRSQGGNNNT WCQDSPLGWM
VWNEDHCDLE LKLFLTRLLK LRQALPQLFN PLIPARETTK KHPQDQTDLW RQWHGVELSK
PDWAAWSRSI ATSLHMGSHG ALIWMGFNAH KEALNFELPV PASPWTRVID TSLPSPKDLP
EQPVPFRGVT IPMQSRSFVL LVAQDEVSNL RL
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