Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0568 |
Symbol | |
ID | 3742895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 573359 |
End bp | 574234 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637770739 |
Product | regucalcin family protein |
Protein accession | YP_376580 |
Protein GI | 78184145 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCTC ACTGTGTTCT TGATGCTCAG GCTGGCTTGG CGGAAGGTCC CCACTGGTGG GCAGAGAAAG GTATTTTTCT TTGGGTGGAT ATCGAAGCCT CGCGGGTGGG CTTATTCGAT CCGGTCGCCC GCAGCAATCG ATTTTTGGAT TTGCCCTCCC ATGTGGGGGC CGTGGTCCCA ACCACGACGG GCGATTTAGT TGCCGCGACG GCCAAGGGGT TTGTGCGACT CAATCCGCAA AGCGGAGTTT TGACTGCCCT TTGCGATCCT GAACCTGGAC GTTCGGAACA TCGCTTCAAC GATGGAAAGT GCGATTCCTG GGGACGGTTT TGGGCGGGAA CGATGGCCTA CGACTTCAGC CCTGGCGCAG GATCACTTTG GCGGTTGAAC AACGATTTCA GCTGCAGTTT GCAATGGCAA GAGCTCACGA TTTCGAACGG TTTGGCCTGG AGCCTTGATC GACGTTTTTT GTATTTGATT GATTCGCCGA CTCTGACGGT GATGGCTTTT CCTCTGACGT CGACCGGTTC ACTAGCAGGC CATCCCACTG CATGCATCAC CATTCCGGCG GAGTGGGATG CCCTACCCGA TGGGATGTGC ATTGATGCGG AGGGCAAGCT GTGGATCGCC CTATTTGGTG GGGGTGCCGT CACCCGTTGG GATCCTCTGG ATGGTCGGTT GATGCAAACG GTGGAGCTTC CCTGTCGCCA GGTCACCTCC TGTTGTTTTG GTGGCCCTGA TTTGGATCAG CTGTTGATCA CCACAGCGCG TCGGGGCCTT GATGCTCAAG CACTAGGGGA ACAGCCCTTG GCAGGAGGTT TGTTTCAGCT GAGCCCTGGT ATTAAGGGAT GCCGATCTGA AATGTTTCGA GTTTAG
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Protein sequence | MKPHCVLDAQ AGLAEGPHWW AEKGIFLWVD IEASRVGLFD PVARSNRFLD LPSHVGAVVP TTTGDLVAAT AKGFVRLNPQ SGVLTALCDP EPGRSEHRFN DGKCDSWGRF WAGTMAYDFS PGAGSLWRLN NDFSCSLQWQ ELTISNGLAW SLDRRFLYLI DSPTLTVMAF PLTSTGSLAG HPTACITIPA EWDALPDGMC IDAEGKLWIA LFGGGAVTRW DPLDGRLMQT VELPCRQVTS CCFGGPDLDQ LLITTARRGL DAQALGEQPL AGGLFQLSPG IKGCRSEMFR V
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