| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0550 |
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| Symbol | |
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| ID | 3743099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 555810 |
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| End bp | 557900 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637770721 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_376562 |
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| Protein GI | 78184127 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.472328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCG AGAGCGGAGC AGTTATCGCC GACTGGGCTT TACCTCCAAA CGGTGGTCCC
CCCACCGATG ACAACACACT GTGGAAGCGC ATCGCAGCGT GGTGGGCTGA GTTCACGCTC
CAAACCAAAT TGCTGGCGGT GGCCACCTTG GTGGTGAGCC TGATGATGAC CGGCATCACC
TTTTTTGCTT TAGCCGGCAT CCAACGGGAT GCCGCCATGA ACGACACCCG CTATGCCAGG
GATCTGGGCT TGCTCCTTGC TGGGAACGTC ACGGAGCTCG TGGCGGATGG CCAAGACCGT
GAGCTTGCCA ACGTTGCCGA GAAATTTTGG CGCTCAAGCC GAAGCGTTCG CTACATCTTT
TTTGCCGACC CCGAAGGCGT TATCTACTTA GGGATTCCGA TCAGCGCGAC GCCCAACGGA
GAAGACGGTG AGCTCCGCCT AAACCGAAGG CTTGAACTAC CCGATGAGCT GAGGCGGCGC
CCCCAAAATC CTCTCGTCCG TCAGCACCTA ACCCCGCAAG GGACAGTGAC CGATGTATTC
GTGCCGTTAA TTCGCAGCGG AACGTATTAC GGGGTCCTGG GACTGGGCGT GAACCCCAAC
GAAACAGCCC TGGCCAGTGC TGCGTTAACC CGCGAAGTCA CCGTGGCGGT GTTTATTTCT
ATTTGGGTGC TGGTGATTCT TGGCGCGGTC TTCAATGCCC TCACAATTAC CCGTCCGGTG
AAAGAGCTAC TCCGCGGGGT CCGCTCCGTG GCCTCCGGTG ATTTCCAAGC CCGCGTGGAC
CTCCCCATGG GTGGTGAACT AGGTGAATTG CTCACTGGGT TCAATGCAAT GGCCTCCCAG
CTGGAGGCCT ACGACGAAGC GAACATCGAG GAACTCACTG CTGCCCAGGT GAAGCAACAG
TCGCTCATCG CGACCATGGC TGATGGAGCG ATTCTGCTGG ATGCCACGGG ACGCATCGTT
CTGGCTAATC CGACCTCGCG ACGCCTATTT CGCTGGGAAG GCCGCAGTCT TGAAGGGCAG
GAATTGGTGG AGGAGCTACC GGAATTACTT TCCATCGAAG TCCACAGCGC TCTGGATGCC
CTCCTGTTCA GCAGCTCGGA CAGTGAAGAC CTGCGCTGCA GTGTGGGCGA ACCCGCCCGG
ACCCTCCGGA TCGTGATGCA AGCCGTGCGC GATGCCAGTG GAGAAAGCCT GAAGGGCATC
GCCGTCACCA TTCAAGATCT CACCCGTGAG GTGGAGCTCA ATGCAGCGCA AAGCCGTTTC
ATCAGCAATG TCTCGCACGA GTTGCGGACC CCGCTGTTCA ACATCAAGAG CTACGTCGAA
ACCCTGCACG ACCTCGGAGA CCAACTCACC GAAGACGAAA AAAAAGAATT TCTCGGCGTA
GCCAACGACG AAACGGATCG ATTAACTCGC TTGGTCAACG ATGTTCTCGA CTTATCCCGA
CTGGAATCAG GCCGAACCGT TCAGTTCGAA ACGATGAACT TGCGGCCCGC CATGGAGCAA
ACCCTGCGGA CCTACCGACT CAATGCTGAG GACAAAACGG TTGAACTCGA ATTAGATGTG
GCGCCTGATC TGCCCGACGT TCTCGGCAAT TGGGATCTAC TTCTACAAGT GTTCGACAAT
TTGGTGGGCA ATGCACTCAA GTTCAGTCGC CCGGGTGGGA TCCTGAGCAT GCGTGCTTAC
GTTTGGCCAG ATACGTGCCG GGTCGAAGCC CCAATCAGCA CGAAGAGTGA GGGCCCCACT
TGCACCCTTA CCTCCCCATT GCCGAGACTT CGTGTCGAGA TAGCAGACAC TGGCTATGGA
ATCAGTGCTC AAGATCAGCA ACGCATTTTC GACCGCTTTT ATCGCGTCGA AAATGCCGTT
CATACCGAAG TTGGCACGGG GCTTGGACTT TCTATTGTCC GTGGAATTCT TGATAAACAT
GGCGCCCAAG TGTCCATGGT TAGTGAATTG GATGTGGGCA CCACATTCTG GTTTGAACTC
CCACTCGAAC AGGCGGATCG AGATGAACTC GCGCTCCAAG CGGAGCGCCG ATCGATCAGC
GCCGCAAGTG ATGACGGCAA CATCGAATCA GTCGCCGTTG GAAGCGATTA A
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| Protein sequence | MSSESGAVIA DWALPPNGGP PTDDNTLWKR IAAWWAEFTL QTKLLAVATL VVSLMMTGIT
FFALAGIQRD AAMNDTRYAR DLGLLLAGNV TELVADGQDR ELANVAEKFW RSSRSVRYIF
FADPEGVIYL GIPISATPNG EDGELRLNRR LELPDELRRR PQNPLVRQHL TPQGTVTDVF
VPLIRSGTYY GVLGLGVNPN ETALASAALT REVTVAVFIS IWVLVILGAV FNALTITRPV
KELLRGVRSV ASGDFQARVD LPMGGELGEL LTGFNAMASQ LEAYDEANIE ELTAAQVKQQ
SLIATMADGA ILLDATGRIV LANPTSRRLF RWEGRSLEGQ ELVEELPELL SIEVHSALDA
LLFSSSDSED LRCSVGEPAR TLRIVMQAVR DASGESLKGI AVTIQDLTRE VELNAAQSRF
ISNVSHELRT PLFNIKSYVE TLHDLGDQLT EDEKKEFLGV ANDETDRLTR LVNDVLDLSR
LESGRTVQFE TMNLRPAMEQ TLRTYRLNAE DKTVELELDV APDLPDVLGN WDLLLQVFDN
LVGNALKFSR PGGILSMRAY VWPDTCRVEA PISTKSEGPT CTLTSPLPRL RVEIADTGYG
ISAQDQQRIF DRFYRVENAV HTEVGTGLGL SIVRGILDKH GAQVSMVSEL DVGTTFWFEL
PLEQADRDEL ALQAERRSIS AASDDGNIES VAVGSD
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