| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0549 |
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| Symbol | |
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| ID | 3743098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 554231 |
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| End bp | 555769 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637770720 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_376561 |
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| Protein GI | 78184126 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction
[COG2874] Predicted ATPases involved in biogenesis of archaeal flagella |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.131026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTC CTCCCGCTAG CGGTCAGTCA CAAATGCAGG TACAAAAGCT CGCAACGGGA
ATTGAGGGCT TTGATGATGT TTGTCACGGT GGACTTCCAA TTGGTCGAAG CACCCTGATC
AGCGGAACGT CCGGCAGCGG TAAAACGGTG TTATCGCTTC ACTTCCTCCA TAACGGAATT
AAGCATTTCG AAGAGCCGGG TATTTTCGTC ACCTTCGAAG AATCACCGCT CGACATCCTG
CGCAATGCGG CCAGCTTCGG ATGGAATCTC CAGGAGATGG TTGAACAAGA CAAACTGTTC
ATTTTGGATG CCTCTCCTGA TCCCGATGGT CAGGATGTGG CCGGCAGCTT TGATCTCTCG
GGTCTGATTG AGCGAATCAA TTATGCGATT CGCAAATACA AAGCGAAGCG GGTTGTCATC
GACTCCATTA CTGCGGTGTT TCAGCAGTAC GACGCCGTTT TTGTGGTGCG TCGTGAAATT
TTCCGACTGA TTGCTCGGCT GAAGGAAATT GGTGTCACTA CGGTGATGAC CACTGAACGC
ATTGATGAGT ACGGACCCAT CGCTCGCTAT GGCGTGGAAG AGTTCGTTTC CGACAATGTC
GTGATTCTCC GCAACGTGTT GGAGGGGGAG CGGCGACGAC GCACGGTGGA GATCCTCAAA
TTGCGTGGCA CCACGCATAT GAAAGGGGAG TTCCCATTCA CGATGGGCGC CCACGGCATC
AGCATTTTCC CCTTGGGTGC GATGCGACTC ACCCAACGGT CATCCAACGT GCGGGTGAGC
TCCGGTGTGC CCCGCTTGGA TGAAATGTGC GGTGGTGGTT TCTTTAAAGA CTCGATCATC
TTGGCCACCG GCGCAACGGG CACTGGCAAG ACGATGTTGG TGTCCAAGTT TATTGAGGAT
GCTTGCCGCA ATAAGGAACG CGCCATTCTT TTTGCCTATG AAGAGTCCCG CGCACAGTTG
ATGCGGAATG GCACCAGCTG GGGGATTGAT TTTGAACAAA TGGAGCAGGA CGGTCTACTC
AAGATTATTT GTGCGTATCC CGAATCTACA GGGTTAGAAG ATCATCTTCA GATCATAAAA
ACTGAAATAA GTGAGTTCAA GCCATCGAGA ATGGCCATTG ATTCGTTATC TGCTTTGGCT
CGTGGTGTTA GCCATAATGC ATTTCGTCAA TTCGTGATTG GTGTTACTGG CTATGCAAAA
CAGGAAGAGA TTGCAGGCTT TTTCACCAAC ACATCTGAGG AGTTTATGGG AAGTCATTCG
ATCACTGACT CCCATATCTC CACGATTACT GACACTATTC TGTTGCTTCA GTATGTAGAG
ATTCGCGGTG AAATGGCCCG TGCCCTCAAT GTGTTCAAGA TGCGAGGCTC CTGGCACGAC
AAAGGTATTC GCGAATTCGT GATCACTGGA AACGGTCCAC AGATCAAAGA TTCTTTCTCC
AACTTTGAAC GAATTATTTC AGGTGTGCCC CATCGCGTCT CCACCGATGA GCGCAGCGAA
TTATCGCGGA TCGCGAGGAG TGTCTCTTCA GACGACTGA
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| Protein sequence | MQFPPASGQS QMQVQKLATG IEGFDDVCHG GLPIGRSTLI SGTSGSGKTV LSLHFLHNGI
KHFEEPGIFV TFEESPLDIL RNAASFGWNL QEMVEQDKLF ILDASPDPDG QDVAGSFDLS
GLIERINYAI RKYKAKRVVI DSITAVFQQY DAVFVVRREI FRLIARLKEI GVTTVMTTER
IDEYGPIARY GVEEFVSDNV VILRNVLEGE RRRRTVEILK LRGTTHMKGE FPFTMGAHGI
SIFPLGAMRL TQRSSNVRVS SGVPRLDEMC GGGFFKDSII LATGATGTGK TMLVSKFIED
ACRNKERAIL FAYEESRAQL MRNGTSWGID FEQMEQDGLL KIICAYPEST GLEDHLQIIK
TEISEFKPSR MAIDSLSALA RGVSHNAFRQ FVIGVTGYAK QEEIAGFFTN TSEEFMGSHS
ITDSHISTIT DTILLLQYVE IRGEMARALN VFKMRGSWHD KGIREFVITG NGPQIKDSFS
NFERIISGVP HRVSTDERSE LSRIARSVSS DD
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