| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0533 |
|---|
| Symbol | |
|---|
| ID | 3743587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 542948 |
|---|
| End bp | 544417 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637770704 |
|---|
| Product | stage II sporulation protein D-like |
|---|
| Protein accession | YP_376545 |
|---|
| Protein GI | 78184110 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2385] Sporulation protein and related proteins |
|---|
| TIGRFAM ID | [TIGR02669] SpoIID/LytB domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAG GCGGCACACT GAAACGCCTT TGGTTGCGCA TGGTGCGGAT CGCTTCAGTT
GTCCTGGCGG GATTTGCGAC AGCGGCTCTG TTCGGTTCCG CTCAGCACGC GATGCCGATG
GAACGGGAGC CTCAGATGCG GGTCCTGTTA CATGAGGGAC CAAAGCTGCT GCTCAGGGCT
GACAAAACGC AGTGGATGCA GGTGCGTGGC TTGGGTGGAG GTGTGCGACG GCTTCGACGG
CTGCAGTTGG AACAAGCCGG TGGGAGCTTC ATAGCCGTTT TGGATGGGAA CCGTCGCCGC
TTGGCTTCAG GCACCGTTTT GACAGTGCAA AACGATGACC CTCGGGGGAT CTGGTTGGAC
TCCCGTCGCT ATCGGGGTGA ATTTCAGATC AGCTGTCGGG GAGGGCGTTT GCGGGTTGTG
AATGCGCTTG GTGTTGAGAC GTACCTCACC AGCGTGGTGG GGAGTGAGAT GCCCCACCAT
TGGCCCTTGG CCGCTTTGAA GGCCCAAGCC GTTGCTGCTC GGACCTATGC CCTTCGGCAG
CGCAGTCGCG GAGGTGGATG GGATGTGAAG GCCAGCGTCG CGAGTCAGGT GTACCGGGGT
GTTGAAGCTG AAACCGCCAG TACCCGCCAG GCGGTGGCTG AGACCCGTTC GTTGGTGCTG
GTCCATCGCG GCAAATTGAT TAATGCGGTG TTTCACAGCA GTTCTGGTGG CGTCACTGAA
TCCAGCGGGA TGGTCTGGAG TCAACAGCTC CCTTATCTCG TGAGCGTCCC AGACCATGAC
CAACACAGTC CGGTCCATCG TTGGCAGGAA CGCTTTGCTT CTTCGGGCTT GCGTCAACGC
CTTCCTGAAA CTGGCGGCGT GAACCGGGTT GATGTCACAA GTCGGAGTGC GAGTGGTCGT
GTGCGACAGG CCAGGCTGGA AGGACCTCGC GGATCCCTTG TGCTGACCGG ACGCGAGTTG
CGTCAGCGTT TGGGCTTGAA AAGCACGTTG GTGACCTTTG AGATGGTGTC TGCTGACTCG
GCAAAGCCGT TCCAATCTTC CACCGTTTTG GCCCGTCGTT CGGCTTCATC CATGGGATCG
AGATCCCGGA TTGACCGCAT CACAGCATCC GTCGCTCGGT CGACAACAAC CAGCTCTTTC
CCTTCAACCT CGTTCTTGGT AGCGCCGCCG CCGCTGCCGC CGGTGCTGTC GAGTCCGATG
CGCTCACGAT CGTTCCGCTT TCGAGCGTCC CGTTCCAACG AGCGTCGGGG TATTGCGGTG
GGTGGATTAC AGCTTTTAGT GCGGGGTCAG GGGTATGGCC ACGGCGTAGG GATGAGCCAA
TGGGGTGCCC ATGGGCTGGC GGAGCAGGGG GCCGATTTCC GCACAATTTT GAGCCATTAC
TACCGAGGAG CAGATGTGCT CCCCTTTAAA TCGCACTACG ACCCAGCCCT CGCTTGGCAG
CCCCATCCGG CGTCAGGCTG GTGGGGTTGA
|
|---|
| Protein sequence | MARGGTLKRL WLRMVRIASV VLAGFATAAL FGSAQHAMPM EREPQMRVLL HEGPKLLLRA
DKTQWMQVRG LGGGVRRLRR LQLEQAGGSF IAVLDGNRRR LASGTVLTVQ NDDPRGIWLD
SRRYRGEFQI SCRGGRLRVV NALGVETYLT SVVGSEMPHH WPLAALKAQA VAARTYALRQ
RSRGGGWDVK ASVASQVYRG VEAETASTRQ AVAETRSLVL VHRGKLINAV FHSSSGGVTE
SSGMVWSQQL PYLVSVPDHD QHSPVHRWQE RFASSGLRQR LPETGGVNRV DVTSRSASGR
VRQARLEGPR GSLVLTGREL RQRLGLKSTL VTFEMVSADS AKPFQSSTVL ARRSASSMGS
RSRIDRITAS VARSTTTSSF PSTSFLVAPP PLPPVLSSPM RSRSFRFRAS RSNERRGIAV
GGLQLLVRGQ GYGHGVGMSQ WGAHGLAEQG ADFRTILSHY YRGADVLPFK SHYDPALAWQ
PHPASGWWG
|
|---|
| |