| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0506 |
|---|
| Symbol | groEL |
|---|
| ID | 3742273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 519237 |
|---|
| End bp | 520871 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637770677 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_376518 |
|---|
| Protein GI | 78184083 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.982033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC GCATTATTTA TAACGAGAAC GCTCGCCGCG CTCTCGAAAA AGGCATTGAC
ATTCTTGCCG AATCCGTTGC TGTCACGTTG GGACCTAAAG GTCGCAACGT TGTTCTCGAG
AAGAAATTCG GTTCTCCTCA GATCATCAAT GATGGTGTCA CCATCGCCAA AGAGATTGAG
CTTGAAGATC ACATTGAGAA CACCGGTGTT GCTCTGATTC GCCAGGCCGC ATCGAAAACC
AACGATGCCG CTGGTGATGG CACCACAACG GCTACCGTCC TTGCCCACGC CATGGTGAAG
GCCGGCCTGC GTAACGTTGC CGCAGGAGCC AACGCCATCA CCCTTAAGAA AGGGATTGAT
AAGGCGTCCG ATTTCTTGGT CGGCAAGATC AAAGACATGG CAAAGCCCAT TGCAGATAGC
AATGCCATTG CCCAGGTCGG CACGATTTCC GCCGGTAATG ACGAAGAAGT CGGCAAAATG
ATCGCCGATG CCATGGATAA GGTCGGTAAA GAGGGCGTGA TTTCCCTGGA AGAAGGCAAG
TCCATGGAGA CTGAGCTCGA GGTCACGGAA GGCATGCGTT TCGATAAGGG ATATATCTCC
CCTTATTTCG CCACCGACAC CGAGCGGATG GAAGCTGTTC TCGATGAGCC TTACATCCTC
TTAACCGATA AGAAGATTGG TCTCGTCCAA GATCTCGTTC CTGTGCTCGA GCAAATTGCA
CGCACTGGAA AACCTCTTCT GATCATTGCT GAGGACATTG AGAAAGAAGC TCTCGCCACC
CTCGTGGTGA ACCGCCTGCG CGGTGTGCTG AATGTGGCAG CCGTTAAGGC TCCTGGTTTT
GGTGATCGCC GTAAGGCCAT GCTTGAAGAC ATGGCTGTGC TGACGAATGG TCAGCTGATC
ACAGAGGACG CTGGCCTCAA ACTCGAGAAC GCCAAGCTGG AGATGTTGGG CACAGCCCGT
CGCATCACCA TCAACAAAGA CACCACCACC ATCGTTGCCG AAGGCAATGA GGCTGCTGTT
GGCGCTCGTT GCGAGCAGAT TAAGAAGCAG ATGGACGAAA CCGACTCCAC CTACGACAAA
GAAAAGCTGC AAGAACGTCT GGCCAAATTG GCTGGTGGTG TTGCTGTTGT GAAAGTTGGT
GCAGCGACCG AAACCGAGAT GAAGGACAAA AAACTTCGTC TGGAAGACGC CATCAATGCC
ACCAAGGCCG CCGTTGAAGA AGGCATTGTT CCAGGTGGTG GTACCACCTT GGCTCACCTG
GCTCCAGCCC TCGAAGAGTG GGCCAATGGC AACCTCTCCG GTGAAGAGTT GATTGGTGCA
AACATTGTTG CGGCAGCTTT AACAGCTCCA TTGATGCGCA TCGCTGAAAA TGCTGGTGCA
AACGGTGCTG TGGTTGCCGA AAATGTTAAG TCGCGTTCAA ACAACGAGGG CTATAACGCT
GCCAATGGCG ACTACGTCGA CATGCTGGCC GCCGGCATTG TTGACCCTGC CAAGGTGACG
CGTTCTGGCT TGCAGAATGC TGCGTCAATC GCTGGCATGG TTCTTACCAC TGAGTGCATT
GTGGCTGACT TACCCGAGAA GAAAGACGCT GCTCCTGCCG GTGGTGGCAT GGGTGGTGGC
GACTTCGATT ATTGA
|
|---|
| Protein sequence | MAKRIIYNEN ARRALEKGID ILAESVAVTL GPKGRNVVLE KKFGSPQIIN DGVTIAKEIE
LEDHIENTGV ALIRQAASKT NDAAGDGTTT ATVLAHAMVK AGLRNVAAGA NAITLKKGID
KASDFLVGKI KDMAKPIADS NAIAQVGTIS AGNDEEVGKM IADAMDKVGK EGVISLEEGK
SMETELEVTE GMRFDKGYIS PYFATDTERM EAVLDEPYIL LTDKKIGLVQ DLVPVLEQIA
RTGKPLLIIA EDIEKEALAT LVVNRLRGVL NVAAVKAPGF GDRRKAMLED MAVLTNGQLI
TEDAGLKLEN AKLEMLGTAR RITINKDTTT IVAEGNEAAV GARCEQIKKQ MDETDSTYDK
EKLQERLAKL AGGVAVVKVG AATETEMKDK KLRLEDAINA TKAAVEEGIV PGGGTTLAHL
APALEEWANG NLSGEELIGA NIVAAALTAP LMRIAENAGA NGAVVAENVK SRSNNEGYNA
ANGDYVDMLA AGIVDPAKVT RSGLQNAASI AGMVLTTECI VADLPEKKDA APAGGGMGGG
DFDY
|
|---|
| |